| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0690 |
|---|
| Symbol | |
|---|
| ID | 4481263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 827233 |
|---|
| End bp | 827826 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 639721433 |
|---|
| Product | electron transport complex, RnfABCDGE type, A subunit |
|---|
| Protein accession | YP_864617 |
|---|
| Protein GI | 117924000 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA |
|---|
| TIGRFAM ID | [TIGR01943] electron transport complex, RnfABCDGE type, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.060913 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.505933 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAG TCTCCTTTTC CAATTTCCTG TTGATCTTGA TCAGCACCGT GTTTGTTAAC
AACTATGTGT TGGCGAAGTT TCTTGGCATT TGCCCCTTTT TGGGGGTTTC CAAAAAAGTA
GAAACCGCCG TGGGCATGAC CCAAGCGGTG ATGTTTGTGA TGACATTGGC CTCGGTTATT
TCGTGGCTGG TGCAGCACTA TATTTTGGAC CCGCTCAATC TGGGTTATCT ACAAACCATC
TCCTTTATTT TGATCATCGC TTCGTTGGTG CAGCTGACGG AGATGGTGGT ACACAAGACC
TCGCCGGTAC TGTACGCCTC GTTGGGGATC TTTTTACCGC TGATCACCAC CAACTGTGCG
GTATTGGGGG TGGCCCTGCT TAACATTCAG CAGGAAAACA ATCTCATCAA TGCCAGTTTC
TATGGGGTAG GTGCCGGGTT GGGTTTTGGA CTGGTGCTTA TTCTGTTTGC CGGTATGCGG
GAGCGTGTGG ATCTGTCGGA TGTACCACGA TTGTTTAAGG GCTCCCCGAT TTCCCTGATC
AATGCTGGCC TGATGTCGCT CGCGTTTATG GGTTTTGCTG GACTGGTCAA ATAG
|
|---|
| Protein sequence | MTEVSFSNFL LILISTVFVN NYVLAKFLGI CPFLGVSKKV ETAVGMTQAV MFVMTLASVI
SWLVQHYILD PLNLGYLQTI SFILIIASLV QLTEMVVHKT SPVLYASLGI FLPLITTNCA
VLGVALLNIQ QENNLINASF YGVGAGLGFG LVLILFAGMR ERVDLSDVPR LFKGSPISLI
NAGLMSLAFM GFAGLVK
|
|---|
| |