| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0688 |
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| Symbol | |
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| ID | 4482427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 824751 |
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| End bp | 826568 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639721431 |
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| Product | electron transport complex, RnfABCDGE type, C subunit |
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| Protein accession | YP_864615 |
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| Protein GI | 117923998 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
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| TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0508448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.631588 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTATTT TGCAGCAGGT GTTACGTGCC TTTCATGGTG GCGTACACCC CGATGAGAAC
AAAGATCTGA CGGCGGCGTG CCGTATTGAG AGCATGCCCA TACCGGCCAG GCTCTATGTG
CCGTTACATC AGCATATTGG CCGTCCTTGT GATCCGGCGG TTGGTATTGG TGACAAGGTG
CTCAAGGGGC AGTTGATTGG CAAGCCAGAC GGCTTTATAT CGGCCCCGGT GCATGCGCCG
ACCTCGGGTA CGATTGTGGA TTTTGTAGAG CATGCGGTGG GGCATCCTTC TGGGTTGCCC
ATGCTGTGTG CGGTGTTGGA CCCCGATGGC GAGGATCGCC TGATTGATGG GATCCAGGGC
TGTACGGATC CCTTTAGCCT GGAACCGGCG CAGATACGTG ATGCGGTGCG TCATGCGGGC
ATTGTGGGCT TGGGTGGGGC GACTTTTCCG AGTCATGTCA AGCTTTCGCC GCCGGGGGAG
AAGAAGGTTG AGTTGCTGGT GCTTAATGGG GTGGAGTGCG AGCCCTATTT AACTTGTGAT
GCGCGTTTGA TGGAAGAGCG CAGCGGGTTA ATTGTGACGG GGGTGCGCAT CATGCTGCAC
GCCTTGCACT GCAAAGAGGC GGTGATTGGT ATTGAGGATA ATAAACCCGG TGCCATTGCG
GCGATGAAGC GTGCGGTGGA GGGGGAGAAA AACATATCGG TGCGGGTATT GCCGGTGATG
TATCCTCAGG GTTCGGAAAA GCAGTTGATT GAGGTATTGA CGGGGCGTCA GGTACCTTCT
GGTGGACTGC CCATTGATGT TGGGGTGGTG TGTCACAACA TTGCCACGGC CATTGCCATT
AAAGAGGCCA TTGTGGATGG CATGCCGTTG CTCAAGCGGG TGGTGACGGT GACGGGGCGG
GCGATTAATC GTCCGGCCAA TGTGGAGTGT CTGTTGGGCA CCACGGTTGG GGACCTGCTC
AAGCAGTGCG GGGGCAGCCG TTCCAGCATG GCTAAGCTGG TGATGGGTGG TCCCATGATG
GGTGTCGCCT TGCAGAGTTT GGCTGCACCG GTGGTTAAGG GGACGTCGGG GCTGTTGGTG
TTGGAGAAGC AGGAGACCAC GGATAATCCT GAAGGTCCCT GTATTCGCTG TGCCAAGTGC
GTGAATGTTT GCCCCATGAG CTTGATGCCC AACGAGATGG CGTGGTTGGC TAAGAATGAT
CAGTTTGATG CTTTAGCGGA TCATGATCTA TTTGATTGTA TTGAGTGTGG TACTTGCTCG
TATGTCTGCC CTTCGTCGAT ACCGTTGGTG CACTATTTCC GGTATGGCAA ATTTGCGATA
CAGGGTAAGA AGCGGGCCAA GCACCGTTCG GATGTGATTA AGGTCCGTAC GGAGATGAAA
GAGAGGCGGG TCGCGGCTGA AAAGGCGGCG AGAGAGGCAA AAAAGGCTGC TCTTAAAGCC
AATCGCGGGG CAGCCAAAGA GCCCGCAGCT GCTGTAGCCG CTACGGATGA AGGTGCCGAA
GCTGGTGAAG AGAAGGCCGC CAAGATTGCC AAGGCCAAAG CGGCGGTAGC GGCGGCTAAG
GCGGCTAAGG CTGAGAGTGG TGGGGCTGAG CCGGTTGTGG CGGCGGGTAT GGATGAAAAA
GCGGCCAAGA TTGCCAAGGC CAAAGCGGCG GCGGCAGCGG CTAAGGCGGC CCGCGAGGCG
GGTCGTGCTG GCGAGGTGGC TGCTGAGCCG GTTGTGTCAG CGGAAGTGGA TGAAAAAGCG
GCCAAGATTG CCAAAGCCAA GGCGGCGGCG GCAGCGGCTA AGGCGGCGAA AGCAGCCCGC
GAGGCTGCTG GTGAGTAG
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| Protein sequence | MGILQQVLRA FHGGVHPDEN KDLTAACRIE SMPIPARLYV PLHQHIGRPC DPAVGIGDKV
LKGQLIGKPD GFISAPVHAP TSGTIVDFVE HAVGHPSGLP MLCAVLDPDG EDRLIDGIQG
CTDPFSLEPA QIRDAVRHAG IVGLGGATFP SHVKLSPPGE KKVELLVLNG VECEPYLTCD
ARLMEERSGL IVTGVRIMLH ALHCKEAVIG IEDNKPGAIA AMKRAVEGEK NISVRVLPVM
YPQGSEKQLI EVLTGRQVPS GGLPIDVGVV CHNIATAIAI KEAIVDGMPL LKRVVTVTGR
AINRPANVEC LLGTTVGDLL KQCGGSRSSM AKLVMGGPMM GVALQSLAAP VVKGTSGLLV
LEKQETTDNP EGPCIRCAKC VNVCPMSLMP NEMAWLAKND QFDALADHDL FDCIECGTCS
YVCPSSIPLV HYFRYGKFAI QGKKRAKHRS DVIKVRTEMK ERRVAAEKAA REAKKAALKA
NRGAAKEPAA AVAATDEGAE AGEEKAAKIA KAKAAVAAAK AAKAESGGAE PVVAAGMDEK
AAKIAKAKAA AAAAKAAREA GRAGEVAAEP VVSAEVDEKA AKIAKAKAAA AAAKAAKAAR
EAAGE
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