Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0687 |
Symbol | |
ID | 4482426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 823576 |
End bp | 824643 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639721430 |
Product | electron transport complex, RnfABCDGE type, D subunit |
Protein accession | YP_864614 |
Protein GI | 117923997 |
COG category | [C] Energy production and conversion |
COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.250696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCTTA TGACCTCTTC GTCGCCCCAC GTGCATGGGG GCGACTCGGT CGACAAGGTG ATGTTGAATG TGATCAAGGC CTTGGCACCG GCGACCTTGT TATCAATCTT TCTGTTTGGC TGGCCTGCGC TGTTGGTGAT TGTGTTGACC GTGCTTTCGT GTGTGGTGAT GGAGCGGTTG ACCAATATGT TAAGGGGGCG TCCCTCGACC ATTGGGGATT ATTCGGCGAT TTTGACCGGC TTGTTATTGG CATTGACCTT ACCGCCCCAT TCGCCCTGGT GGATATGTGT GGTGGGGGGG GTATTTGCGA TTGGGGTTGG CAAGTCGGTG TATGGGGGGT TGGGTTACAA CATGTTTAAC CCTGCGTTGA TTGCGCGGGT ATTTTTGTTG ATTTCGTTCC CTGTGCAGTT GACCACTTGG CCACAGATTA GCCCTCTTTT TGCGGCGGAC TCTTTTTCAT TGGCGCAATC CTTTTCGATT ATTTTTGCGG GGGATTACGG CAGTGTGGTG ATGGACAGCA TTACGGCGGC GACGCCGTTG GGGCATTACC GTATTGAGAC GGGGTTGGGC AAGAGTGTTG CGGAGGCTTT GGGTGGGGAT TTTGGCTTTA GTTTTTCTCA CTCGATTGCG GGGGACATTG GTGGTTCGTT GGGTGAGACG TCGGCGTTGG CGTTGGTGGC TGGCGGCATA TGGATGATCC GCAAGGGTTT GATCACGTGG CACATACCGG TTTCGATGAT TTTGGGTACG GTTATTCCGG CGACGGTGAT GTGGCTGATT AATGGTGATG TTTATCCAGA TCCGCTGTTT CATTTGGTGA CGGGTGGTTT GCTTTTGGGG GCTTTTTTTA TGGCCACCGA CATGGTGACA TCGCCGGTGA CGCCTAGGGG TATGTTAATT TTTGGCGGGT TATGTGGGGT GTTGACCTAT GTGATTCGTA CTTGGGGGGG GTATCCTGAG GGGGTATCTT TTGCGGTGGT GATTATGAAC ACGGCGGTGC CGTTGATTGA TCAGTACACC AAGCCGGTGG TTTATGGTAA GTCCAAGAAG GAGAAGGCCA ATGCCTAG
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Protein sequence | MTLMTSSSPH VHGGDSVDKV MLNVIKALAP ATLLSIFLFG WPALLVIVLT VLSCVVMERL TNMLRGRPST IGDYSAILTG LLLALTLPPH SPWWICVVGG VFAIGVGKSV YGGLGYNMFN PALIARVFLL ISFPVQLTTW PQISPLFAAD SFSLAQSFSI IFAGDYGSVV MDSITAATPL GHYRIETGLG KSVAEALGGD FGFSFSHSIA GDIGGSLGET SALALVAGGI WMIRKGLITW HIPVSMILGT VIPATVMWLI NGDVYPDPLF HLVTGGLLLG AFFMATDMVT SPVTPRGMLI FGGLCGVLTY VIRTWGGYPE GVSFAVVIMN TAVPLIDQYT KPVVYGKSKK EKANA
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