Gene Mmc1_0683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0683 
Symbol 
ID4482422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp819604 
End bp819891 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content53% 
IMG OID639721426 
Productaspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C 
Protein accessionYP_864610 
Protein GI117923993 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 
TIGRFAM ID[TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.185391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTTA CCAAAGAGAC CGTACAACAC GTGGCCAACC TGGCCCGATT ACAGTTCAAT 
GAAGAAGAGA CCGAACGCTT TTCCGGCCAA ATCTCCCGCA TTGTCGACCT AATGGATGCC
CTCAGCAAAC TCCCTACTGA AGGGGTTAAA CCCATGTCCC ACGCCGTGGA TATGGCTATC
CCCCAACGGG ACGATGTGGT CACCAACGGC AACCAACGCG ACACCATGCT CGCCAATGCC
CCTGATGCCG AAAAAGGTCA CTTCCGCGTT CCCAAAGTTA TCGAATAA
 
Protein sequence
MSVTKETVQH VANLARLQFN EEETERFSGQ ISRIVDLMDA LSKLPTEGVK PMSHAVDMAI 
PQRDDVVTNG NQRDTMLANA PDAEKGHFRV PKVIE