Gene Mmc1_0681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0681 
Symbol 
ID4482420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp816633 
End bp818093 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content53% 
IMG OID639721424 
Productaspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B 
Protein accessionYP_864608 
Protein GI117923991 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) 
TIGRFAM ID[TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.114273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATCG ATCCGGCATA TGAAATGGTC ATTGGTCTGG AAGTACATGC CCAGATGTTG 
ACCCAATCCA AAATTTTCTG CGGCTGCTCC ACCGCGTTCG GAGCCCCCGC TAATACCCAA
ATCTGCCCTG TTTGCAGTGG TTTTCCAGGT GTGCTTCCGG TATTGAACAA AGAAGCCGTC
AATATGGCGA TCAAAACCGG TTTGGCCATT GAAGGCGAGG TTCGCATGCA AAGCGAATTT
AGCCGTAAAA ACTATTTTTA CCCCGACCTA CCATCGGGCT ATCAGATCAC CCAGTTTGAG
CTGCCCATTG TTGAACATGG CAAGGTGTTG ATCGAAGATA AGGATGTACC TGCTAAAGTG
GTGGGCATTA CCCGTATTCA TATGGAGGTC GACGCCGGTA AATCCATTCA CGAAGGGGTG
GTTGGGGGTA CCTGGGTTGA CCTTAACCGT ACCGGCGTAC CGCTGATGGA GATTGTCTCC
GAACCGGATA TGTCCACCCC CGAAGAGGCC GGGGCCTACC TGAAAAAATT ACGCTCCATC
GTGCGCTACC TGGAAGTGTG CGATGGCAAC ATGGAACAAG GCTCGTTCCG CTGCGACGCC
AACGTGTCGG TGCGTAAAAA AGGCGACCCC AAACTCGGTA CCCGCTGCGA GCTGAAAAAC
CTAAACTCCA TCCGCAATGT CATGCGCGCC ATTGAGTTGG AAGCCGAACG CCACATTGAT
ATTTTAGAAG AGGGGGGTAG CATTGTACAG GAGACCCGGC TCTATGACGC CAACCTCAAC
GAAACCCGCT CCATGCGCAG TAAAGAGGAT GCCCACGACT ACCGCTATTT CCCCGAGCCC
GACCTGCCAC TATTGGTATT GAGTGAGCAG CAGATTGCCA CCGTCAAGGC CACCCTGCCC
GAGCTGCCCG ATGCTAAGCG GGAGCGGTTT GAAACGGCCT ATGGCCTCTC CCACTACGAT
GCTTCGGTGT TAACCACCAG CCGCGCCCTC TCTCGCTACT ATGAAACGGT GGTGGAGCAG
GTTAAGGCGG GGGGACAAAA TGACCCCAAA ATCTGCGCCA ACTGGGTAAC GGTTGAGCTG
TTGGCGCTGC TGAATAAAGA GAATAAAGAG ATTGAGCAAT CGCCGGTGAG TGCGACCAAT
CTGGCTAAAA TGGTGGTGCG TATTCTGGAT AACACCATCT CGGGCAAAAT TGCCAAAGAG
GTGTTTGCCA GCATGTTTGA AAGCGGCAGT GATCCCGACA CCATTATTGA AGAGAAGGGG
CTTAAACAGA TCACCGACAG CGGTGCCATT GAGGCCGCCA TTGATAAGGT TTTGGCCCTC
AATAGTACCC AGGTTGAGCA ATATCGCGGT GGCCAAGAGA AACTGTTTGG CTTTTTTATC
GGTCAGGTGA TGAAAGCCAC CCAAGGCAAG GCCAATCCAG CGGAACTAAA CAAACTGCTC
AAGCAAAAGC TCGGCGGATG A
 
Protein sequence
MSIDPAYEMV IGLEVHAQML TQSKIFCGCS TAFGAPANTQ ICPVCSGFPG VLPVLNKEAV 
NMAIKTGLAI EGEVRMQSEF SRKNYFYPDL PSGYQITQFE LPIVEHGKVL IEDKDVPAKV
VGITRIHMEV DAGKSIHEGV VGGTWVDLNR TGVPLMEIVS EPDMSTPEEA GAYLKKLRSI
VRYLEVCDGN MEQGSFRCDA NVSVRKKGDP KLGTRCELKN LNSIRNVMRA IELEAERHID
ILEEGGSIVQ ETRLYDANLN ETRSMRSKED AHDYRYFPEP DLPLLVLSEQ QIATVKATLP
ELPDAKRERF ETAYGLSHYD ASVLTTSRAL SRYYETVVEQ VKAGGQNDPK ICANWVTVEL
LALLNKENKE IEQSPVSATN LAKMVVRILD NTISGKIAKE VFASMFESGS DPDTIIEEKG
LKQITDSGAI EAAIDKVLAL NSTQVEQYRG GQEKLFGFFI GQVMKATQGK ANPAELNKLL
KQKLGG