Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0649 |
Symbol | |
ID | 4482912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 782361 |
End bp | 783749 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639721392 |
Product | type III restriction enzyme, res subunit |
Protein accession | YP_864576 |
Protein GI | 117923959 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.674278 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGTATCA CCTTCAATCT GGGAACCTTG ATCCTGCACG GTTCTGCGGA AGAGCTGGCC CTGGTGGCCG AGCATGTCAC CTGGGATGAC CGCATTCACG CCTACCGAGC CGAAGCCCGC TATTATGGCA CGATTGCACT GGCCCTGCAT CGCGCAAAGA TCGCTTTTGA CGATCAAGCG CGTGCCTTTG ACAAACAGCC TTTTCAGTTG GTGAGCCCCC TACACCCCCG CCCGCACCAA CAGATTGCCA TTCAAAAGTG GGCAGAAAAC AACCACACCG GGGTGGTGGT GCTGCCCACC GGTTCGGGCA AATCCTTGGT GGCCCGGCTG GCCATGCAGC GGGTCCGCCG CAATACCCTG ATCACCGTCC CGACCCTGGA TCTGATGCAT CAATGGGTCG AGCAGCTACA TGCGGCTTTT AACCAAGAGA TCGGCATGTT GGGTGGTGGT GAACACAGCC TACACCCCAT CACCGTCAGC ACGTATGATT CCGCTGCCAT TCATATGGAG CGTTACGGCT GCCGATTTGG TCTGCTTATC TGTGATGAGT GCCACCATCT GCCCACCCCC AGCACCCGGC TGGTGGCCAC CATGTGCATG GCACCCTTTC GCCTAGGGCT TACCGCCACC CCAGAGCGCA GCGATGGCGG CGAAACCACC CTCTATGATC TGTTGGGTGC CCAAGTCCAC CGGGTCGAGA TTCAGCATCT CGAAGGGGAG TATCTGGCCA ACTATGATCT GCATCAGGTA CCCATTATCT TGGACGATGA CGAGCGCGAA GTCTACGATA CCGCCTACCA CCACTATAAA CAGTTTGCCC AAATCAACGG CTGCCGTTTA GGCTCACCGG GGGGATGGAA CAACTTTATC ATGCTCTGCA CCCGCTCCAA AGAGGGGCGC GAGGCATTTA AAGCCTACCA CACACAAAAG CGCATCGCCC GCGCCAGCCG TGCCAAACTA CGCGCCGTCT GGCACCTATT ACGGGAACAC CGTGGCGAGC AGGCGATTCT TTTTACCGAC GATAACGCCA CGGCCTACGC CATTGGCGAG ACCTTTTTTC TACCGGTTAT CACCCATAAA ACCCGCCTCG CCGAACGCAA GGCACTGTTG GATCACTTTC GCGCGGGGCA GATCCGCCAC ATGGTCACTT CTCGGGTGCT CAACGAAGGG GTGGATGTGC CGGATGTCGC GGTGGGTATT ATTGTCTCGG GCACCGGTTC GGTGCGGGAG CATGTGCAGC GGCTGGGGCG CATCTTGCGG CCCCGCCAGG GTAAACAGGC GGTGCTCTAT GAGCTGGTGA GTGAAGATAC CGCCGAGACC TACACCAGCG CCCGCCGCCG CCAACATGCG GCTTACCAAA AAGAGCAAGG GGTGTTGGAT CCATGCTAA
|
Protein sequence | MRITFNLGTL ILHGSAEELA LVAEHVTWDD RIHAYRAEAR YYGTIALALH RAKIAFDDQA RAFDKQPFQL VSPLHPRPHQ QIAIQKWAEN NHTGVVVLPT GSGKSLVARL AMQRVRRNTL ITVPTLDLMH QWVEQLHAAF NQEIGMLGGG EHSLHPITVS TYDSAAIHME RYGCRFGLLI CDECHHLPTP STRLVATMCM APFRLGLTAT PERSDGGETT LYDLLGAQVH RVEIQHLEGE YLANYDLHQV PIILDDDERE VYDTAYHHYK QFAQINGCRL GSPGGWNNFI MLCTRSKEGR EAFKAYHTQK RIARASRAKL RAVWHLLREH RGEQAILFTD DNATAYAIGE TFFLPVITHK TRLAERKALL DHFRAGQIRH MVTSRVLNEG VDVPDVAVGI IVSGTGSVRE HVQRLGRILR PRQGKQAVLY ELVSEDTAET YTSARRRQHA AYQKEQGVLD PC
|
| |