| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0647 |
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| Symbol | |
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| ID | 4482910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 777949 |
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| End bp | 781143 |
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| Gene Length | 3195 bp |
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| Protein Length | 1064 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639721390 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_864574 |
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| Protein GI | 117923957 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGATAC AGCGTCGCGT ATTGGGGCTC ATCGCGTTTT TTCTGTTGGT GGCTTTTAGT
GCCGTAGAGG TGCGCTCCTA TTATCAGTTA AAGGCGTATG CCGAGGAGAG TTTGCGCACG
CAAGCAGAGA TTGTGCAGGG TCTTCTAATG TCCATCCGGC GGGTCTACCA TCATGCCTTT
CTTGATAGCC ATATTCCCCT ATCGTCCGAT ACCGTGCCGC TGTTGCCGGC CCATGCGATC
AATCGCATCT CCAAAGAGTT CCCGACTTGG TTTAAAGGTG GGGTGAGCTT TAATAATGTG
TCCGACAAAC CCCGCAATGA GCAGCAAAGG GCCAAGGGTA TCGAGCAACA GGCGATGGCC
CATTTTCGCC AAAATCCCGA AGAAAAACGC TGGTTCACCC AATATCAAGA GGAAAATGGC
GAGGCTTACT ACCACTACGC CACCCCCATC TGGATCGAAC CTTACTGCAT GCAATGTCAT
GGGGCTAAAG AAAAAGCGCC TGCGGCCATT CAAAAAATGT ACAGCACCGG TTTTGACTAC
AAGATTGGGG ATCTGCGTGG CGTGGTGAGT ATTAAGCTGC CCGCCGCCCA CATCAACCGT
TTGGTTAAAC AGCAATTTTT GGAAAATAGT TTAATCCATC TGCTGATCTT TGGCTCAGCC
TTTTTTGCCA TCAGCTTTTT TTTAAGGCGG GATGTGGGCC AGCCCTTGGA GGCCATCTCA
CATGCGGTGC GCAAATTTGG ACAGACTCGG GAGTTGCCCA AGTTTGAAGA GCAACCGGGT
GAATTTCAGA TATTGCTTCA CACCTTGACC GATATGGCCA GTACAGTGGT GCTGCGAGAG
AGCGAGGTGC AAGAGCGTCA GTTACAGATC GAGCTGCTGT TGGACTCTGC CGGCGAAGGG
ATCTATGCTA TTGATACCCA GGGTATTTGC ATTCAGTGTA ACCCTGCGGC GGTCGCGTTG
TTGGGGTATG CCAGCAGCAC CGAACTGGTG GGTCGGGATA TCCATACCCT GTGCCATCGT
GCCGATGAAC AGGGTACGCA TATGCCCCAC AGCGATTGCC CCGGCTGCAA GGTCATTGCC
AGTGGCGAGC CGGTGCACCT GGCTCAAGAG TATCTACAGC GCCAGGATGG TAGCGTGTTC
CCGGTGGAGA TGCGCATTCA CCCCATGCAT CAGGGGGGGA GGGTGGTGGG TGCGGTGGTG
CTGTTTGATG ATATTTCACG ACGCTTGGAT GCCGAACAGA AACTGCGCCT GTCCGAGCGG
CATTTCCGCA CTTTGGTACA AGCGTTACCC GGTACTTTTT ATAAGTGTGC CCCAGATCCC
TTGTGTACCA TGTACAGCTT GGGTGACAAC ATTGCCGAGC TGACAGGTTA TGCAGCTGAC
AGCTTTATTG AAAATCATGA GCGTAGTTTT AGCAGTGTGG TGCATGCCGA GGATTGGCCC
AGGGTGAGAG AAGCCTTGGA TCAAGCACTG GCGCAGGGGG TTGTGTATCA CCTGGAGTAT
CGTGTTAACC ACACCGACGG CAAACCACGT TGGGTGATGG ATCGTGGGCA AGCGGTCTAT
GATGAAGCGG GTAGGGCCGA GGTGCTCTAC GGCGTCTTGC TGGATATGAC CGAGCGTAAA
CAGTATGAGC AGCGCTTGGA GAGTGCCCGC CAGCAGGCCG ATGCAGGCAA CCGCGCCAAA
AGTGAGTTTT TAGCGGTGAT GAGCCATGAG ATTCGCACTC CGCTTAATGC CATTATGGGG
ATGGGGGATC TGTTGGGAGA GACCGCGCTC AGTCCGGTAC AGCGCCACTA TCTGAGCATC
AGCCAGCATG CGGGGGAAAC CCTGGTGGAG TTGATTGAAG ATATTCTGGA TCTCTCCCGT
ATAGAAGTGG GTGAACTGGA GCTGGAGCCT GCACCGTTTG AGGTGGAAGC CTTGGTGGAG
GAGGTGTGCG AGGTGGTAAC ATCCTCGGCC CATGATAAAG GGCTGATTCT ACTCATGCGC
ATCGACCCGC TGTTACCACC GGTATTGATC GGAGATAAAA AACGTCTGCG CCAAATTTTA
TTTAACCTGT TGTTTAATGC CGTCAAGTTT ACCAAGCATG GCGAGGTGAT GTTGGATATT
CGCCACGATG CTGCCCGTTC GGCGGCGGGG GCTGTTCTGT TACAGGTGCG CGATACCGGG
GTGGGTATGG CCGAAGAGAT GATCGAGCGG GTCTTTGAAC CCTTTACCCA AGGGGACTCC
ACCATTACCC GGCAGTATGG TGGCAGCGGT TTGGGCTTGA CCATTTGCAA GCGCTTGGTG
AGCAAAATGG GGGGGGATAT TCAACTGGAG AGTGCGTTGG GTCGGGGTAC GACCGCGACG
GTACAGTTGG TGTTGCCGGT GGGACGCCAT GGCATGGTGG CGGCTGTTCG TCAGCAGGTG
CCGCTACACG GGGCGAACCT GTTGTTGGTG GATGATAACG CCAACAACCG CGAAATTTAT
ACGGAGCTCT TGCAGCAAGA GGGGGCCCGG GTGGTGGGCT GTGCCACAGG CGAGACGGCC
ATGCAACAGG TGAGCGAGGC AAACTTTGAT CTGGCGGTGT TGGATTTTCA TATGCCCTCA
GAGGATGGCT TAACCCTGGC CGGGCGTATC CAGGAGATGG TGCCCAACAT GCCTCTACTG
ATGCTGAGTT CCGATCAACA GCCGGCGGCG GCGGCGCGGG CCAACAGCAT GGGTGTGACC
TTTTTGTTAA AGCCGGTCAA GCGGCAGCTG TTACGTCAAA CCATCGCCCA GTTGATGCAG
TCAGGCAAGG GTGTCAAGGA TGCTCCTGTA CTTGGGCAGG GCGTGGAGTC CGGGCCGCAG
AAAGGGCTTA AAATTTTGCT GGCCGAGGAT GTGCCAGAAA ATGCCCTGTT GATTGAAGCC
TATTTGGAAG AAACAGGGCA CCAAATCAGT GTGGTGGGGG ATGGTCAGCA GGCGTTTGAG
CGTTTTCAAG AAGAACCGTT TGATCTGGTG CTTATGGATC TACAAATGCC GGTGATGAAC
GGCTTGCAAG CGACCCGTCA TATCCGTGCC TGGGAGCAGG CACAAGGGGT AAAACGCACC
CCTATTTTGG CCCTGACTGC CCACGCCATG AAAGAGGACG AGTCTAAATC CTTAGAGGCG
GGTTGTGATG GGCACCTAAC CAAACCCATA CGTAAGCAAG TTTTTTTGCA AAAGTTGCAA
GGGTTCCTGG GTTAA
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| Protein sequence | MGIQRRVLGL IAFFLLVAFS AVEVRSYYQL KAYAEESLRT QAEIVQGLLM SIRRVYHHAF
LDSHIPLSSD TVPLLPAHAI NRISKEFPTW FKGGVSFNNV SDKPRNEQQR AKGIEQQAMA
HFRQNPEEKR WFTQYQEENG EAYYHYATPI WIEPYCMQCH GAKEKAPAAI QKMYSTGFDY
KIGDLRGVVS IKLPAAHINR LVKQQFLENS LIHLLIFGSA FFAISFFLRR DVGQPLEAIS
HAVRKFGQTR ELPKFEEQPG EFQILLHTLT DMASTVVLRE SEVQERQLQI ELLLDSAGEG
IYAIDTQGIC IQCNPAAVAL LGYASSTELV GRDIHTLCHR ADEQGTHMPH SDCPGCKVIA
SGEPVHLAQE YLQRQDGSVF PVEMRIHPMH QGGRVVGAVV LFDDISRRLD AEQKLRLSER
HFRTLVQALP GTFYKCAPDP LCTMYSLGDN IAELTGYAAD SFIENHERSF SSVVHAEDWP
RVREALDQAL AQGVVYHLEY RVNHTDGKPR WVMDRGQAVY DEAGRAEVLY GVLLDMTERK
QYEQRLESAR QQADAGNRAK SEFLAVMSHE IRTPLNAIMG MGDLLGETAL SPVQRHYLSI
SQHAGETLVE LIEDILDLSR IEVGELELEP APFEVEALVE EVCEVVTSSA HDKGLILLMR
IDPLLPPVLI GDKKRLRQIL FNLLFNAVKF TKHGEVMLDI RHDAARSAAG AVLLQVRDTG
VGMAEEMIER VFEPFTQGDS TITRQYGGSG LGLTICKRLV SKMGGDIQLE SALGRGTTAT
VQLVLPVGRH GMVAAVRQQV PLHGANLLLV DDNANNREIY TELLQQEGAR VVGCATGETA
MQQVSEANFD LAVLDFHMPS EDGLTLAGRI QEMVPNMPLL MLSSDQQPAA AARANSMGVT
FLLKPVKRQL LRQTIAQLMQ SGKGVKDAPV LGQGVESGPQ KGLKILLAED VPENALLIEA
YLEETGHQIS VVGDGQQAFE RFQEEPFDLV LMDLQMPVMN GLQATRHIRA WEQAQGVKRT
PILALTAHAM KEDESKSLEA GCDGHLTKPI RKQVFLQKLQ GFLG
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