| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0585 |
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| Symbol | |
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| ID | 4481785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 707742 |
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| End bp | 709355 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639721328 |
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| Product | lipopolysaccharide biosynthesis |
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| Protein accession | YP_864512 |
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| Protein GI | 117923895 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR03007] polysaccharide chain length determinant protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.976376 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGAGT ACAGCCTGCG CAATTTACAG TATCAGCTCT TGGTACAACT GCACGGTATG
TGGCGGTATC GCTGGCATAT TGTGTTGGTG TCGTGGACGG TGTGTATCTT GGGTTGGACA
GGCACCTTTA TGATGGAGGA TCAGTACAAA GCCTTCACCA AGGTCTCTAT TGAAAACCCC
CAAGGCGACC TGAACGAGTA TCTAACGGGT GTGGCAAAAA TGCGCTTTGA TGTCACCAGT
GAGGCGCAGC GCATTGTGCA TAACCTGCTC AACCAAAAAA ATCGTGAGCG GGTGGTGCTC
TCGACCAAAC TGCGTGAAGA GGTGCGTGAT GAGCGCAGCT TGGAAGAGAC CATCGCCAAA
CTGGGTCAGC AACTGACCAT TACCTCCCGC AGCAGTAGCA CCCAGTCGGT CTACACTCTG
ACCCATCACC ACTCTGACCC TGAGGTGGCA AAACAGGTGG TGGAAGGCTT TTTGACCATC
TTGATGGAGC ACTCGGTGGA GGGGGTCAAA AACCGGCGTC AGGAAAAAGC ACAGCGCTTT
TTATCGGAGC AGGTGCAAAA ATTTGAGGAT AAATTTGCCA AAAGCGACTT GGCGTGGCAA
GAGTTTAAAC GTAGTAACCC CTTGATTCGC CCCGATCAAG GCCAGGGTTA TTATGCCCGC
TTGGCTGACT TTAAACAGCG TGCAGAAGAT GAACGGCTCA AACTGAGTGC CTTGAGTAAA
GAGCGGGACG CCCTGGCGGA GCAGTTGGCC CAACGCCAGC GTGCGACCTT GGCCTCGACC
CCGCTACAGG CGCCCCGTGC CGTGGTTGCA CCGCTCAATG AAGAGATTGA TCGCAACCTG
GAGCAGTTGG AAGAGCGCAT TCTGGAGATG CTGGAAACCC ACTATGTGGT GGGGGGGGAA
AAGCGCTATC TCTATGATGA AGCTCACCCA GAAATTCGCT CCTTGCGCAA TCAGATTTTG
GAACTGCAAC GGCGCAAAGA AGAAGAGATG GCCCGGCTGA AAAGTCTGAG TGAGATGCCC
CAGCAGGCAT TTAACGATGA AAAGGATCCT GTTGCACAGC AGATTTTATT GGATCTGCGC
AAGGTAGAGG TGGATCTTGC CTCAGCCCAG GGGCGGTTGC AGGAGTATAA TGCGCAGCTG
GCCGATTTAC GGCGGCGGGA GGCCACGGTA CCCGCCAAGG AGGCGGAGTA TCTGCGTCTC
AAGCAAAATC GGGATACCGC CCTGAGTAAG CTGAACAGTA TTTTGACGAC CCAGGGTGAG
GCGGAGTTTT CGGGGGATGT GGCTGAAGGT TTAAGCAAGC GGGTACACAT CAAAGTGTTG
CAGAAGCCGC GTCTGCCTTT TGCGCCAGAG GGGCCCAATC GTCCGTTGTT TTTGGTGGTT
ACCCTGCTGG CGGGTTTAGG GGCCGGTATG ACCATGTCGC TGTTTATGTC GATTATGCGA
CCCGTTTATG ATAGCCCATC GGCATTAAAG AAAGATCTTG GGCTGCCGGT GTTGGGCACG
GTCTCTATGG CCGATGAGAC CGCAGTGGTG GGTTTGGGGG CGCGGACCCT GTTTATGTTG
TTGATGATCT CGCTACTGGT GATCTTTGCC ATCACCATGT ATATCGCCAG ATGA
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| Protein sequence | MQEYSLRNLQ YQLLVQLHGM WRYRWHIVLV SWTVCILGWT GTFMMEDQYK AFTKVSIENP
QGDLNEYLTG VAKMRFDVTS EAQRIVHNLL NQKNRERVVL STKLREEVRD ERSLEETIAK
LGQQLTITSR SSSTQSVYTL THHHSDPEVA KQVVEGFLTI LMEHSVEGVK NRRQEKAQRF
LSEQVQKFED KFAKSDLAWQ EFKRSNPLIR PDQGQGYYAR LADFKQRAED ERLKLSALSK
ERDALAEQLA QRQRATLAST PLQAPRAVVA PLNEEIDRNL EQLEERILEM LETHYVVGGE
KRYLYDEAHP EIRSLRNQIL ELQRRKEEEM ARLKSLSEMP QQAFNDEKDP VAQQILLDLR
KVEVDLASAQ GRLQEYNAQL ADLRRREATV PAKEAEYLRL KQNRDTALSK LNSILTTQGE
AEFSGDVAEG LSKRVHIKVL QKPRLPFAPE GPNRPLFLVV TLLAGLGAGM TMSLFMSIMR
PVYDSPSALK KDLGLPVLGT VSMADETAVV GLGARTLFML LMISLLVIFA ITMYIAR
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