Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0582 |
Symbol | |
ID | 4481504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 703662 |
End bp | 705026 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639721325 |
Product | O-antigen polymerase |
Protein accession | YP_864509 |
Protein GI | 117923892 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | [TIGR03097] probable O-glycosylation ligase, exosortase system type 1-associated |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.814347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGATC TGATCCTTAC ACTGTTTATT GTCGGTTCGC TACCGTATGC CTTTATGCGG CCCAGCTATG GGTTGTTGAT GTGGGCGTTG CTCAGCTATA TGAACCCCCA CCGGCTCACT TGGAGCTATG CCTATGATTT TCGGTTCAAC TTTTTAGTCG CGTTTGTCAC TCTGGCTGGT GTGTTTTTTA ATAAAGAGGT CAAGTTTCGC ATCCCCATCC ATGGTACCAC CATCTTTTGG ATGTTCTTCT GTTTATGGAC GGTGGTCACT TCTTTCAACT CCTTTGATCC TGACCGGGCT TTTTCGGAGT TTGACCGTTT TCTAAAAATT CAGTTGATGG TGTTGATTAC CTTCTTTTTG ATTAAAGACC GAAAATGGAT GGATTGGCTG ATCTGGGTGA TTGTGCTCTC CATTGGGGTG TGGGTCATGA AGGGTGGACT GTTTACCCTG ACCTCGGGGG GGAATTTCCG GGTGTATGGT CCGGCCCGTA GCTTTATTAC CGACAATAAT GCCTTGGCGT TGGCCGTGTT AATGGGGCTG CCGCTGACTT TTTATATTAG ACAGTTTGCC AAACGATTAT GGCAAAAGCA GCTGGCGCTC GTATTAATTA TTTTTTCGGT CATTACCGTG GTGGGCAGCT ACTCCCGTGG AGGGATGTTG GGCTTGGTGG TGGTCTTGGG CGTGTTGTTT GGCCGTAGCC GACGGGGCAT GATTGTCTTT TTGCTGGGGG TGGTGTTGGT GGCCCTCTCT TATACCTCCA TGCCCAAGCA TTGGCAGGAG CGGATGGATG ATTTTTTTGC GATCAGCACG GCTTATGAGT TGCGCGAGGA TGCCTCTATG ATGGGACGTC TCAACTCTTG GGTGTTGGCC TGGGAGTTGG CGAAGGATCG TCCCTTTGTC GGTGGGGGCT TTAATACCTT TACTGCGGAG CGCTTTCAAA CCTACGCACC GGTGCCCTTT GAGCGGCACG ATGCCCATAG TATCTATTTT GAGGTCATGG CAGAGCACGG TTTTTTTGGT TTTGCCCTGT TTATTGGAAT GCATCTGTTT GCGGTGCTAC TAGGCTTTAA GGTCAAACAT TTAGCTCGTG GCAAGCCCGA GTTGGATTGG GCGGTTACCC TTGCGACTAT GTTGCAAATA TCGTTGTTGG GGTACTATGT AGCGGGGGTG TTTTTAGGCT TGGCCTATTT TGACCTGCCC TATCACCTAA TCTCCATTTT GGTGATGTTG CACCATATTG TACTCAAACA CAGTGATAAA AAAGTGGTCC CCTCTGCCAC AGCTTGGCAA GAACCGACCT ATGGAATGAC AACTTGGTCA CGTAAGACGG ACTATTCCAT TTTTGGTCGC TCTGCGGGCC AGTAG
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Protein sequence | MRDLILTLFI VGSLPYAFMR PSYGLLMWAL LSYMNPHRLT WSYAYDFRFN FLVAFVTLAG VFFNKEVKFR IPIHGTTIFW MFFCLWTVVT SFNSFDPDRA FSEFDRFLKI QLMVLITFFL IKDRKWMDWL IWVIVLSIGV WVMKGGLFTL TSGGNFRVYG PARSFITDNN ALALAVLMGL PLTFYIRQFA KRLWQKQLAL VLIIFSVITV VGSYSRGGML GLVVVLGVLF GRSRRGMIVF LLGVVLVALS YTSMPKHWQE RMDDFFAIST AYELREDASM MGRLNSWVLA WELAKDRPFV GGGFNTFTAE RFQTYAPVPF ERHDAHSIYF EVMAEHGFFG FALFIGMHLF AVLLGFKVKH LARGKPELDW AVTLATMLQI SLLGYYVAGV FLGLAYFDLP YHLISILVML HHIVLKHSDK KVVPSATAWQ EPTYGMTTWS RKTDYSIFGR SAGQ
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