Gene Mmc1_0582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0582 
Symbol 
ID4481504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp703662 
End bp705026 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content49% 
IMG OID639721325 
ProductO-antigen polymerase 
Protein accessionYP_864509 
Protein GI117923892 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3307] Lipid A core - O-antigen ligase and related enzymes 
TIGRFAM ID[TIGR03097] probable O-glycosylation ligase, exosortase system type 1-associated 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.814347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGATC TGATCCTTAC ACTGTTTATT GTCGGTTCGC TACCGTATGC CTTTATGCGG 
CCCAGCTATG GGTTGTTGAT GTGGGCGTTG CTCAGCTATA TGAACCCCCA CCGGCTCACT
TGGAGCTATG CCTATGATTT TCGGTTCAAC TTTTTAGTCG CGTTTGTCAC TCTGGCTGGT
GTGTTTTTTA ATAAAGAGGT CAAGTTTCGC ATCCCCATCC ATGGTACCAC CATCTTTTGG
ATGTTCTTCT GTTTATGGAC GGTGGTCACT TCTTTCAACT CCTTTGATCC TGACCGGGCT
TTTTCGGAGT TTGACCGTTT TCTAAAAATT CAGTTGATGG TGTTGATTAC CTTCTTTTTG
ATTAAAGACC GAAAATGGAT GGATTGGCTG ATCTGGGTGA TTGTGCTCTC CATTGGGGTG
TGGGTCATGA AGGGTGGACT GTTTACCCTG ACCTCGGGGG GGAATTTCCG GGTGTATGGT
CCGGCCCGTA GCTTTATTAC CGACAATAAT GCCTTGGCGT TGGCCGTGTT AATGGGGCTG
CCGCTGACTT TTTATATTAG ACAGTTTGCC AAACGATTAT GGCAAAAGCA GCTGGCGCTC
GTATTAATTA TTTTTTCGGT CATTACCGTG GTGGGCAGCT ACTCCCGTGG AGGGATGTTG
GGCTTGGTGG TGGTCTTGGG CGTGTTGTTT GGCCGTAGCC GACGGGGCAT GATTGTCTTT
TTGCTGGGGG TGGTGTTGGT GGCCCTCTCT TATACCTCCA TGCCCAAGCA TTGGCAGGAG
CGGATGGATG ATTTTTTTGC GATCAGCACG GCTTATGAGT TGCGCGAGGA TGCCTCTATG
ATGGGACGTC TCAACTCTTG GGTGTTGGCC TGGGAGTTGG CGAAGGATCG TCCCTTTGTC
GGTGGGGGCT TTAATACCTT TACTGCGGAG CGCTTTCAAA CCTACGCACC GGTGCCCTTT
GAGCGGCACG ATGCCCATAG TATCTATTTT GAGGTCATGG CAGAGCACGG TTTTTTTGGT
TTTGCCCTGT TTATTGGAAT GCATCTGTTT GCGGTGCTAC TAGGCTTTAA GGTCAAACAT
TTAGCTCGTG GCAAGCCCGA GTTGGATTGG GCGGTTACCC TTGCGACTAT GTTGCAAATA
TCGTTGTTGG GGTACTATGT AGCGGGGGTG TTTTTAGGCT TGGCCTATTT TGACCTGCCC
TATCACCTAA TCTCCATTTT GGTGATGTTG CACCATATTG TACTCAAACA CAGTGATAAA
AAAGTGGTCC CCTCTGCCAC AGCTTGGCAA GAACCGACCT ATGGAATGAC AACTTGGTCA
CGTAAGACGG ACTATTCCAT TTTTGGTCGC TCTGCGGGCC AGTAG
 
Protein sequence
MRDLILTLFI VGSLPYAFMR PSYGLLMWAL LSYMNPHRLT WSYAYDFRFN FLVAFVTLAG 
VFFNKEVKFR IPIHGTTIFW MFFCLWTVVT SFNSFDPDRA FSEFDRFLKI QLMVLITFFL
IKDRKWMDWL IWVIVLSIGV WVMKGGLFTL TSGGNFRVYG PARSFITDNN ALALAVLMGL
PLTFYIRQFA KRLWQKQLAL VLIIFSVITV VGSYSRGGML GLVVVLGVLF GRSRRGMIVF
LLGVVLVALS YTSMPKHWQE RMDDFFAIST AYELREDASM MGRLNSWVLA WELAKDRPFV
GGGFNTFTAE RFQTYAPVPF ERHDAHSIYF EVMAEHGFFG FALFIGMHLF AVLLGFKVKH
LARGKPELDW AVTLATMLQI SLLGYYVAGV FLGLAYFDLP YHLISILVML HHIVLKHSDK
KVVPSATAWQ EPTYGMTTWS RKTDYSIFGR SAGQ