| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0555 |
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| Symbol | |
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| ID | 4481389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 673958 |
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| End bp | 674923 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639721302 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_864486 |
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| Protein GI | 117923869 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCCAA CATCCATAAC GCCAGCGGCC TGGCAACAGC AAAACCGTGT CGCGAACACC
ACGACCACGG TGGGTGGCGA TGCCGAAGCC TTTCAACAGG CGCTGCAACG GGCCAGTGAC
ACAGGCTTGC GCCCTGCTGC GCTTAATAAC ACCATGGTGG AGTATCTTAC CCGTGCGGTG
CAAGGCTCCT TAAACAGTCA AACACCGGCT CAAGGTGGTG CAGCGGTACA GACGCGGCCG
CATTTGGTGG ATCGTTCGGC GGCCAACTGG ATCTATCAGT CGGTGCCCAA TGGTGGGGTG
GTGCTGGTCA ACCCCAAACA TGTCAACGCG GTCTATATGC AGCAGCGGGT AGAGAGTCAT
GTAGCCCCCG GTCAGGTTAA CCGCAGCAGC GTGGGGCAGG TGGCGAAAAG CGCCTTTGGA
GCGACCCATC AAAATGGTGG TGGTATGGCC GATGAGCAGC ACCGTCGAGA GGTGCCTCGC
ATTGCCCTAA ACCACAGCCC GGCGGCGCGT CTGGCCGAGG TAACAGGGGG GCGGCGTGTG
GCCGCCCAAA CCGTAACCAC CTCGCCCAAC ATCCCTTTTG CCGGTTTAAT TGAACGGGCG
TCGGTAAGCA GTGGGGTGGA TGAGCGGCTG TTGCGTTCTG TCATCTATGT GGGTTCGCAT
TTTGACCCAC GGGCGGTGTC GGCAGAGGGT GCCCAAGGTT TGGTGCAGTT AAAGCCGCAA
GTCTGGTCGG ATATGGGGGT TACCGACCCC TTTGAGGCCG AGCAAAATGT GATGGGGGGT
AGCCGCTATC TGCGTACCCT GTTAGACCGC TATCAAGGGC AGCGGGATCT GGCCTTGGCC
GCCATGCACT GGGGCGTGAA CCAGTTGGAG CGTAATCCCG ATGCCATCCC CGACCGCACC
GCCGATTTTA TCCACAAGGT GGCTAAATTG TTGGATGCCG ATGAGGGTTC GCAAGTGATG
GTCTAG
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| Protein sequence | MFPTSITPAA WQQQNRVANT TTTVGGDAEA FQQALQRASD TGLRPAALNN TMVEYLTRAV
QGSLNSQTPA QGGAAVQTRP HLVDRSAANW IYQSVPNGGV VLVNPKHVNA VYMQQRVESH
VAPGQVNRSS VGQVAKSAFG ATHQNGGGMA DEQHRREVPR IALNHSPAAR LAEVTGGRRV
AAQTVTTSPN IPFAGLIERA SVSSGVDERL LRSVIYVGSH FDPRAVSAEG AQGLVQLKPQ
VWSDMGVTDP FEAEQNVMGG SRYLRTLLDR YQGQRDLALA AMHWGVNQLE RNPDAIPDRT
ADFIHKVAKL LDADEGSQVM V
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