| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0548 |
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| Symbol | |
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| ID | 4481452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 663044 |
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| End bp | 665212 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639721295 |
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| Product | ABC transporter related |
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| Protein accession | YP_864479 |
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| Protein GI | 117923862 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCAAA CCACCCCCCA ACAACCCCCA CATTGGACAC TGGAGGGGCA CGACCCACGC
AGTGAAGACC CCCTTTTGGG CACCCTGTTG TTTCTGGCCC ACCATTGGCA CTTGCCCGCC
ACGGTGCAGA GCCTAACAGC AAACCTACCC CTGACCGAAG CGGGCCTAAC CCCCGAACTT
TTTTTGCGTG CTGCTGAACA GGCTGGCCTG AAGGCCCATA TTCGCAAACA GCCCTTACAC
GCACTGCACA CGGAACACCT GCCCGCCGTG CTGCTCTTGC ATGGCCGTAT GGCTGTGGTA
CTGCTGGGCT GGGATGAGGA TGAAGCCCAC CTGCTGCTGC CCGAAAGTGG CCGCGAAACC
CGTCTGGATC GCCAAGCACT CGACGAGCGC TACGAAGGCC ACGCCATTCT GGTAAGCCCC
ATGTTTAAAC ATGATGCCCG CACCAGCTTT ATTGGCAACC CAACCACGGG TCACTGGTTT
TGGAGTGCGC TGTTCCGTTA CTGGCCTATC TACAGCGAAG TTGCCGTGGC CTCCTTACTT
ATTAACCTCT TTACCGTGGC CTCCTCACTG TTTGTCATGA ACGTCTATGA CCGCGTGGTG
CCCAACAAAG CCATGGAGAC CCTCTGGGTT TTGGCCCTTG GGGTAGCCAT TGTCTACTGC
TTTGATTTTT TACTACGCAC CCTACGCGCC CATTTTTTGG ATACCGCTGG AAAACGGGTG
GATATTGTAC TGGCCTCAAA CATCTACCGC CATGTTAGCG GCATGCAGTT AAGCTACCAG
CCCCAAAGCA CCGGAGCCAT GGCGCGTAAT CTTCAAGAGT TTGAACCCCT GCGTGACTTT
TTCACCTCGG CCACCCTTAC CGCCATTATC GACCTCCCTT TCACCCTGAT TTTTGTGGTG
TTGGTCGCGC AACTGGGTGG CCTTAATGTC GCCATGGTCC CCCTGGTCTG CATGCCAGTG
GTGATTCTGG TTGGGCTTCT GCTGCAAGCC CCCCTTAACC GGGTCATGAA TCGTGCCCTC
AAAGAGTCTG CCCAGAAAAA CGCCATGCTG GTGGAAACCC TGGGCCGCCT AGAGACCATC
AAACTTAATA ATGCCGAAGG ACACCTTGCC GGCAAGTGGG AAAATTGCAT CATCGAAACC
GCTAAAACCG CCCAGCAGTC GCGTTTTCTC TCCACCCTGG GGGTGAATTT CGCCATGCTT
GTGCAGCAGT TTAGCTCGGT GGCGGTGGTG GTGGTGGGGG TTTATGCCAT CAATGCCGGT
GAGATCACCA TGGGGGCGCT CATCGCCTGT ACCATTCTGA CCGGGCGGGC CTTGGCCCCC
CTCTCCCAGG TGGCAGGTTT GATGGTGCGC ATTCAACAAA CCATGATCTC CCTACGCACC
CTCAATCAAA TCATGAACAC CCCCCAAGAG CGCCCCGAGG GACGCACCTT TCTTAGCCGC
CCTCGCCTCT CGGGTAAGAT TCAACTCAAA GATCTTTCGT TCCAGTACCC CAATGCCAAA
ACCGCCGCTT TGCAAAAGCT TAATCTACTC ATTGAACCCG GTGAAAAAGT CGGCTTTATC
GGACGGGTTG GATCAGGCAA AAGCACTTTG CTTAAATTGC TGCAAGGACT CTACCCCCCC
ACCGAAGGCC TGGTTTTGGT GGATGATATG GATGCCCGTC AAATCGACCC CGCCGACCTG
CGCCGCAATA TGGGTTGTGT GACCCAAGAT GCCGGCCTAC TCTATGGTAC CATTCGTGAA
AACATTACCT TGGGCGCCCC CTTTGCCGAT GATTCCACCC TACGCCGCGC GGTGGAACAG
GGGGGTGTTG CGGCGTTTAC CGATCGCCAT CCCGATGGCT TGGATCTGGT TATCGGTGAG
CAGGGCCAGG GCCTTTCGGG TGGGCAGCGG CAGTGCGTTT CCATCGCCCG TGCGTTGATC
CATAACCCTC CCATTTTGCT GCTGGACGAA CCTACCAGCG CCATGGATAG CGGCTCGGAG
GAGCGTTTTA AAAAGGTGAT TGAAGATACG TTACCTGGCA AAACCTTGCT GTTGGTAACC
CATCGGGCCT CCTTACTCTC CTTGGTGGAT CGTGTTGTAA TCATTGAAGA TGGCCAAATT
CTTGCCGATG GCCCTAAAGA GGCCATTTTA TGGCAACTTA AAGAAGGCAA ATTTAGGGTT
AAAAGCTGA
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| Protein sequence | MDQTTPQQPP HWTLEGHDPR SEDPLLGTLL FLAHHWHLPA TVQSLTANLP LTEAGLTPEL
FLRAAEQAGL KAHIRKQPLH ALHTEHLPAV LLLHGRMAVV LLGWDEDEAH LLLPESGRET
RLDRQALDER YEGHAILVSP MFKHDARTSF IGNPTTGHWF WSALFRYWPI YSEVAVASLL
INLFTVASSL FVMNVYDRVV PNKAMETLWV LALGVAIVYC FDFLLRTLRA HFLDTAGKRV
DIVLASNIYR HVSGMQLSYQ PQSTGAMARN LQEFEPLRDF FTSATLTAII DLPFTLIFVV
LVAQLGGLNV AMVPLVCMPV VILVGLLLQA PLNRVMNRAL KESAQKNAML VETLGRLETI
KLNNAEGHLA GKWENCIIET AKTAQQSRFL STLGVNFAML VQQFSSVAVV VVGVYAINAG
EITMGALIAC TILTGRALAP LSQVAGLMVR IQQTMISLRT LNQIMNTPQE RPEGRTFLSR
PRLSGKIQLK DLSFQYPNAK TAALQKLNLL IEPGEKVGFI GRVGSGKSTL LKLLQGLYPP
TEGLVLVDDM DARQIDPADL RRNMGCVTQD AGLLYGTIRE NITLGAPFAD DSTLRRAVEQ
GGVAAFTDRH PDGLDLVIGE QGQGLSGGQR QCVSIARALI HNPPILLLDE PTSAMDSGSE
ERFKKVIEDT LPGKTLLLVT HRASLLSLVD RVVIIEDGQI LADGPKEAIL WQLKEGKFRV
KS
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