| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0547 |
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| Symbol | |
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| ID | 4481451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 661725 |
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| End bp | 663044 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639721294 |
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| Product | HlyD family type I secretion membrane fusion protein |
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| Protein accession | YP_864478 |
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| Protein GI | 117923861 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAAT GGAATTCAGA GAGTTTTGCA GACGCCCGCA TCACCGCGCG ATCCGCCCGT
ATTGGGGTAG TTAGCCATGT GCTGTTATGG TGCTCGACCC TCTTTTTTGC GGTGGCGCTG
CTGTGGGCGG CCTATGCGGA GGTGGTTGAA GCCACCACCG GCATGGGTAA AGTCATTCCA
TCAGGTCAAG TCCAGCGCAT TCAAAGCCTA GAACCGGGCC GTCTGACGGA ACGCTTGGTG
CGCGAGGGGG ATGAGGTTAA GACGGGGGAT ATCCTACTGC GTATTGATGA TACCCAGTTT
CAGGCCACCT ATAATGAGAG TGCGGCCCGT ATCCTTGCTC TGCAAGCCCG CATCGCGCGG
CTAACGGCTG AAGCGCAAGG GGCCAGCGTG TTTGAAGTGC CGGGGGCCAT TCTTGAACAA
GATCCTGAGC TGGCGGCCTC GGAGCAGTCG CTGTTCAAAA GTCGGCGCCA GAGCCTGCTC
AACAACATAC AGATCCGTGA ACAGCAGATC GTGCAGCGCC AACAGGAGCT GGCTGAAGCA
GAGTCGGCCA TCCTGCAATT TCAAGAGCGC CTCCACCTAA CCCGTAAGGA GATCAAACTG
ACCCAACCGC TGGTCGAAAA AGGGTTGGTG GGTGAAGTGA CCCTGCTGCA CGCGCAACGG
GAAGAGGCCA ACCTAAAGGG TGAAATCACC AGCCTGCAAC ATGCCATCCC CCGCGCCCGC
TCGGCATTAA TCGAGAGCAA AAGCAAACTT GAAGAGGCCA CCCTTGCCTT TAAATCGCAG
GTTCAAGAAG ATCTGAACAC CGCCAGCAGT GAACTGACAC GCATCCAACA ATCCAGCAGC
GCTTTGGAAG ATCGGGTGAC ACGCAGCGCC ATTCGCTCAC CGGTCAACGG TACAGTTATC
CGGGTCCATG TCAACACCAT CGGTCAGGTG GTGCAGTCTG GCGCAACCCT GATGGAGATC
ATGCCTACCG AGGATTCTCT CCTGGTCGAG GCGCGTATTG ACCCCAAAGA TATTGCGTTC
CTACACCCAG GGCAGCCCGC CACGGTTAAG TTTACCGCCT ATGATTTTTC CATCTATGGC
GGGTTAGAGG GTGAGTTGAC CCACATCAGT GCCGATGCCA TTACCGATGA AAATGGGCAA
GCCGCCTATC TGGTGCAGGT GCGCACCAAA GATAAGAGCA TGCGCCGCAA CGGCAAGGTG
CTGCCCATCA TCCCAGGTAT GGTGGCATCG GTGGATGTTA TAACCGGTCA AAAAACCATT
TTAAACTATC TTCTTAAACC TATTTTTAAG GCCCGCGACA ATGCACTGCG TGAACGCTAA
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| Protein sequence | MSQWNSESFA DARITARSAR IGVVSHVLLW CSTLFFAVAL LWAAYAEVVE ATTGMGKVIP
SGQVQRIQSL EPGRLTERLV REGDEVKTGD ILLRIDDTQF QATYNESAAR ILALQARIAR
LTAEAQGASV FEVPGAILEQ DPELAASEQS LFKSRRQSLL NNIQIREQQI VQRQQELAEA
ESAILQFQER LHLTRKEIKL TQPLVEKGLV GEVTLLHAQR EEANLKGEIT SLQHAIPRAR
SALIESKSKL EEATLAFKSQ VQEDLNTASS ELTRIQQSSS ALEDRVTRSA IRSPVNGTVI
RVHVNTIGQV VQSGATLMEI MPTEDSLLVE ARIDPKDIAF LHPGQPATVK FTAYDFSIYG
GLEGELTHIS ADAITDENGQ AAYLVQVRTK DKSMRRNGKV LPIIPGMVAS VDVITGQKTI
LNYLLKPIFK ARDNALRER
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