| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0546 |
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| Symbol | |
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| ID | 4481450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 659979 |
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| End bp | 661313 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639721293 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_864477 |
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| Protein GI | 117923860 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAGC ATCGATCGAC TCAACTTTTA ACCCTGTTAT CCCTCACATG GGGTATGGGT
AGCGCTTGGG CACAGGAAGG TGCTCCCTTG ACCTTGCAGG ATGCTGTGCT CAAGGCGCTC
AGCAGCAACC CTGAAGTGCT GGCCTCGTGG GAAAACAAAC AAGCCAATAC CCAACTGGTG
CGCCAGGCAC GGGCAGGCTA TTTTCCTACC CTCGATCTGG CTGCGGGTTA CGGTAAAGAG
GTGACGGATA ATACCACCAC GCGGGCCGCT AATAAGGGTA CCACCACCAT GAACCGGGGG
GAATCCAGCG CCACAGTGAG TCAAAAACTG TTTGATGGCC TGTCCACCTA CACCAACGTT
AAACGTGCAA AAGCCTCAGA CCAATCCTCA TTACACGCCT TTGATCGCAC CGCTGAAAAA
GTGGGTAGAC AAGCGATGGA AGCCTTTATG GAACGCGCCA AGCAGCAGCA AATTTTGGCG
CTGACCGCAG AGAATGTGCA AGACCACGAA GAGACCCTAA AAAAGCTTAA AGCTCTCGCC
GCTGGTGGCC AAGGCAAAAA GGCTGACGTA CAACAGACCG AAAGCCGCCT GTTTAGCGCC
AAGGATACCC TGGTTCAAGC CAAAGGTAAG ATTAATATCG CCGGGGCAAC CTACGAACGG
GTTATTGGCG AAAGCCCAGG CATGTTGGCG ACCCCAGCGC TCCCTAAAGA GAATCTGCCT
GAAACCCTTG ATCAGGCCCT AGAGATTGCC GCACAGATGC ATCCGCTGCT GTTAGGTTCG
CAACAAGACC TCAATGCGGC GACCTTTGCC AAGTTAAAAT CCAGATCCAG CTTCATGCCT
AGCATTACCC TGGACCTTAC AGCCAGCAAT AATGGCAATG TGAGCGGGAC CCGTGGTTAT
GCCCAGGCTA TGTCAGCCAT GCTGAACATG AAATATAATA TTTTCAATGG CGGCAGTGAT
TTAGCAGCTT ACCGTGAGAG CGATCATCGC ATCAACCAAA CCCGTGAAAC GCTCTCTCTA
AACCAGCGTA CTGTGCGTGA GCAAGTGATC ACCGCATGGG AACAGATGGA GATGGCTAAG
CACAGCGTTG CGCTGGTGGA AAAACAGGTC AAAGCGCAGC AAGATACCGT TAAATCCTAC
CTGCAAGAGT TTGAACTGGA TAAACGCACC CATTTGGATG TGCTCAATGC CAAAAACGAG
CTCTATCGGG CACGTGTCCA GCAGGTATCT GGTAATTTTG ACTATATCAT GCGTGTTTAT
CAACTCTGGT CAGCAATGGG TGTGATGCGA GAGAATATGG GTCTTCATCA AACACCCGTT
ATGGCGAAAC ATTAA
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| Protein sequence | MLKHRSTQLL TLLSLTWGMG SAWAQEGAPL TLQDAVLKAL SSNPEVLASW ENKQANTQLV
RQARAGYFPT LDLAAGYGKE VTDNTTTRAA NKGTTTMNRG ESSATVSQKL FDGLSTYTNV
KRAKASDQSS LHAFDRTAEK VGRQAMEAFM ERAKQQQILA LTAENVQDHE ETLKKLKALA
AGGQGKKADV QQTESRLFSA KDTLVQAKGK INIAGATYER VIGESPGMLA TPALPKENLP
ETLDQALEIA AQMHPLLLGS QQDLNAATFA KLKSRSSFMP SITLDLTASN NGNVSGTRGY
AQAMSAMLNM KYNIFNGGSD LAAYRESDHR INQTRETLSL NQRTVREQVI TAWEQMEMAK
HSVALVEKQV KAQQDTVKSY LQEFELDKRT HLDVLNAKNE LYRARVQQVS GNFDYIMRVY
QLWSAMGVMR ENMGLHQTPV MAKH
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