| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0542 |
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| Symbol | |
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| ID | 4481446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 651055 |
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| End bp | 654963 |
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| Gene Length | 3909 bp |
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| Protein Length | 1302 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639721289 |
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| Product | periplasmic sensor hybrid histidine kinase |
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| Protein accession | YP_864473 |
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| Protein GI | 117923856 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCCGT TTTCACTGCC TATTCGTTAT GCCTTTTACG CCTTTGTCTT GATGGGCGGC
GGCTTATTGT CAATCGCCAG CTATGGTTTT CAACAAGCCA GTGCCTTGCT GGCGTTGCAG
ACCGCACAAA TGGTGACCAG CCACGTTACC AATGAAATTA GTTTTTTGCG TGACACCATT
GTGCAGATGC GCCAGGACAT GGATATTTTG CTCCACAGTC CGGTGCTGCT CGACTATCTG
GACAACCCCC AAGGGAGCCC CGCGCCACTG AGCGAGCAGA TGATTGGCAT CATGCAAAAT
CGTCCCTCCT ATGCTCAGTT CCGATTGATT TGTATTGAGG ATGAGGGCAA GGAGAAGATA
CGCATAGAGC GAAGAATCGG TAATATTATA GCGACCTTGG TACCGGCCCA GCTACAAACC
AAAGGCAACC GACCCTATTA CAAAACCGCT TTAGAGTTGC CCCGTGGACG CGACACCATA
AGCCCCATTG AGCTCAACCA AGAACATGGT CAGGTGGAGC ATCCCATTCG CCCTGTTATG
CGCCTTTCTA CCCCAGTGTA TGATTCTCAC AACCTCATCC GTGGGGTTAT GGTGATTAAT
CTGGATTTTT CCCAAGTGGT CAAACGCCTC GCCACTCTGG ACAATCGGGT ATCCATTCGC
CTTATCTATC CCAATGGCGA GTACCTCTAC CATCCCGATG CGACCCGCAT GTTTACCCTT
AGTCAGGGTG GCCCTGCGGG ACTGTTTCAG GAGTATCCTC AACTAACATG GCCTGACTTT
AATACCCTTA TTGAAGGGGA ACCCTTTCTG ATCCCACTCA AAGCCCAGCA CAAACTGATC
GCCGGACAGC TCATCCATCT CGATTCTCAG CAGCGGAGCC CCCCTTTGAT TGTGCTGGGT
GTAACCTCAG ATCGCATGCT TCAGTTGCTT ACCAATCAAT TGGCGCACAA GCTTACCTTG
ATCGTGCTTG CACTGGTGAC CCTGCTTACC CTCCTAACGG CCTGGATGGC CTATCGCCTC
TGGGCGCCCT TACGGGACCT TACCGAGTCG GCGCACATGT TGGCAAAGTC ACTTCATGAG
GGCAGCATTC CCCACCAAAA TCGCCAGGAT GAGGTGGGCA CCTTGGCGCG GGCGATTCAC
CTTTTATTGC AACGATTACA GCATATTCAT CAACGCACAC AACGGTTTAA TGAGCAGTTA
CAAACAGAGG TTGCGCAACG CACCACCGCA CTGCAAGAGA CCATTGCGCT GGCTGATGAG
CGGCGCTCTT TGCTTGCCGA GGTACAGAGC ATGGCCCGCA TCGGGGGATG TGCGTGGGAT
CCTACCCACG ACCAGCTGTC GGTAACAGAG GCCTTTTTAC AACTGACCAA CAGTTATGGG
GCTCCCCCTA CCACGTTGCA GGATCTGCTT GATCTCTATG GGATCGAGGA TCGAGAGCGG
CTCCAGCATA TGTTGGAGAT TGCCCTTCAG AGTGGTCTAA AAGGGGATAT GGTCGCCAGT
CTGGGCGGGC ATAACCAGCT CTGGCTGCGC ACCCTGTTGC AACCCATTCG ACAAGGCCCG
GCCACCATAA AAATTCACAT CGTTATTCAG GATATTACCC GTGAACATCT GATCCAGGAG
GCCCATACTC GCGAGGAACG TCGGAATACA TGGCTCTTAA AACTCAATGA GGTGGCCTAC
GCCAGTGGGG ATGCCCTCAT GGAGCTTGCG CTCCAGGGTG CCATTACTTT ATCGGCCAGT
CCCCAAGCTT TTTTTATCTG GATGGACAGC AGCCTAAACC ATATTTGTCA GGAGCGTCTC
TATCCAGCGC CAAGGGATCC TGCCGCGGTG GATCGCTACC GCCCGGCGCG TTTTGCCCCC
AGCCAACAAG CGTTTATTAG TAAGGAGTCG GTGCTCCACC ATGCCCAAGC GGCGACGGAT
CAGCCTGCTT TGGTGCTGCC CTTGTTTGAG GATCGTCAGG TTATCGCGCT ACTGGGGGTA
TTGGGTGCAA GCACACCCTA TGACAACCGG GACATCCAAC ACCTACACTA TTTTGCCCAA
GGGTTGTGGC GGGTATTACA GCGGCGTCGG GATCAAGAGA TGGTTAAACA GGCCACCGCC
GAAGCCCAAC GGGCCAATGC CGTTAAAGGG CGGTTTTTGG CCAATATGAG TCATGAAATT
CGCACCCCCA TGAACGCTAT TATGGGTTTT ACCGAGCTGA GTCTAACCCA GCATCCGCCC
GCCCCCCATG ATCGCCATCT GCAAGCCATC CGCACCGCCA GCCAGACCTT ACTGGCTTTG
CTGAATGATG TGTTGGATTT TTCAAAAATT GATGCTGAGC AGTTGGCGTT GGAGCAGATT
CCCTTCTCCC CAACGGAACA GTTGCAGCAG ATCGCGCAGA TGCTGGCGCC CCAGGCGCAA
GCCAAAGGTT TGCACTTTCA TACCTTTCAA CAAGGGAGCA TGCCAACCCT GTTGTTAGGC
GATGCCTTGC GGCTACGCCA AGTGTTGATC AACTTGGTGA GCAATGCCAT CAAGTTCACC
CACCAGGGCA AGGTGGTGCT GGGCATGTAT GGCAACGAGC CCACCCCCGA GGGCCGTTGT
CTGCTGCGCT TCGAGGTGAT CGACAGCGGT ATTGGCATTG AGGCATCCCA ACAAGAGCGG
CTGTTTCAAC CCTTTGTGCA GGGAGATCTC TCTACCACCC GCACCTATGG TGGTAGCGGT
TTGGGGCTGG CTATTAGCAA GCGGTTGGTC CACCTCATGG GGGGAGAGAT GCAGCTTGAG
AGTACCCTGG GCGCAGGCAG TAAATTTTCG TGTCTGCTGC CTTTTAGTCT GTGTAAGGAT
GACCTTGCGA AGAGCTTAAC CCCATCGGCA CAGACATTAA GCATTCCCCA TTGGCCCGAT
GTAACGCTGT TGGTGGCGGA GGATAACCGG CTTAATCGTG AGATGCTGCA AGAGCTCTTG
GCGCGGGCGC AGATTGGCTG TCTGCACGCC GTCAACGGCA CCGAGGCGGT GGCGATGTTA
GAGCGCGATA ATTTTCCCCT ACACGGGGTT TTGATGGATA TGCAGATGCC CCAAATGGAC
GGCCTAACCG CTACCCAGCT GATCCGGCTG CACCATCCTA AGGGCACCCT ACCCATCATT
GCGATGACAG CCAATGGCAC GGCGGCGGAT CGTCAACGTT GTCTAGAGGC AGGTATGGAT
GATTGTTTGA TCAAACCCAT CGACATGCAG ACCCTCTACA GCACCTTACG CCTCTGGTTG
CCCGAACCCC AGGGCGAAGA GGACCCCTAC CAGCAACCCC TGTTAGCGAG TCAGCAGCGC
TGGCAGCAGT GGCAACCTGA CCCTCAACTC ATCGACAAGC AAGACCTGTT TCTGCGATTG
GGTGGGGATT TTGACCGTTT AATGAACCGC CTTGGCTACT TTGCCACGGA GTGTGAGCGC
TACTTTACGC CCCTTACCCA CGCCTATACC GAACGGGACA CCACCACCGT ACTGAGTGCT
GCCCACGCCA TGAAGGGGAT CGCTAAAAAC CTCTCCCTGC TCCAGCTTGC TGACTACCTG
GAACGTTTGG AAGCGATGGT GCAGCAACAT GGCTGCGATG CACCCGGACT TAGCAGCTTG
TGGCAGCATC TGCTGACCTG CCAACAGGCT ACGTGCTTGG CCATGCCTGC GCAACTGCCC
CCCGCGACCA CGCCCCCCTC CCCACAATTA GAAGCGGACA TGACCCAATT TATGGCCTTG
TTAAACGACA ATGACCTTCA GGCCAAAGCG CTGCTGCAAC AACTTTTCCC CCTGTTACAA
CAGCGCGGGC AGGGGCAGTT GGCGGCAGAT TTAGAGAACG CCCTAGCCCA GTTTGACTTT
GCCCAAGCAC GCGCGCTGTT GCAGAACCCT AACCCCTCAT ACAACCCTCT CAAACCTGCC
GTGCCTTGA
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| Protein sequence | MLPFSLPIRY AFYAFVLMGG GLLSIASYGF QQASALLALQ TAQMVTSHVT NEISFLRDTI
VQMRQDMDIL LHSPVLLDYL DNPQGSPAPL SEQMIGIMQN RPSYAQFRLI CIEDEGKEKI
RIERRIGNII ATLVPAQLQT KGNRPYYKTA LELPRGRDTI SPIELNQEHG QVEHPIRPVM
RLSTPVYDSH NLIRGVMVIN LDFSQVVKRL ATLDNRVSIR LIYPNGEYLY HPDATRMFTL
SQGGPAGLFQ EYPQLTWPDF NTLIEGEPFL IPLKAQHKLI AGQLIHLDSQ QRSPPLIVLG
VTSDRMLQLL TNQLAHKLTL IVLALVTLLT LLTAWMAYRL WAPLRDLTES AHMLAKSLHE
GSIPHQNRQD EVGTLARAIH LLLQRLQHIH QRTQRFNEQL QTEVAQRTTA LQETIALADE
RRSLLAEVQS MARIGGCAWD PTHDQLSVTE AFLQLTNSYG APPTTLQDLL DLYGIEDRER
LQHMLEIALQ SGLKGDMVAS LGGHNQLWLR TLLQPIRQGP ATIKIHIVIQ DITREHLIQE
AHTREERRNT WLLKLNEVAY ASGDALMELA LQGAITLSAS PQAFFIWMDS SLNHICQERL
YPAPRDPAAV DRYRPARFAP SQQAFISKES VLHHAQAATD QPALVLPLFE DRQVIALLGV
LGASTPYDNR DIQHLHYFAQ GLWRVLQRRR DQEMVKQATA EAQRANAVKG RFLANMSHEI
RTPMNAIMGF TELSLTQHPP APHDRHLQAI RTASQTLLAL LNDVLDFSKI DAEQLALEQI
PFSPTEQLQQ IAQMLAPQAQ AKGLHFHTFQ QGSMPTLLLG DALRLRQVLI NLVSNAIKFT
HQGKVVLGMY GNEPTPEGRC LLRFEVIDSG IGIEASQQER LFQPFVQGDL STTRTYGGSG
LGLAISKRLV HLMGGEMQLE STLGAGSKFS CLLPFSLCKD DLAKSLTPSA QTLSIPHWPD
VTLLVAEDNR LNREMLQELL ARAQIGCLHA VNGTEAVAML ERDNFPLHGV LMDMQMPQMD
GLTATQLIRL HHPKGTLPII AMTANGTAAD RQRCLEAGMD DCLIKPIDMQ TLYSTLRLWL
PEPQGEEDPY QQPLLASQQR WQQWQPDPQL IDKQDLFLRL GGDFDRLMNR LGYFATECER
YFTPLTHAYT ERDTTTVLSA AHAMKGIAKN LSLLQLADYL ERLEAMVQQH GCDAPGLSSL
WQHLLTCQQA TCLAMPAQLP PATTPPSPQL EADMTQFMAL LNDNDLQAKA LLQQLFPLLQ
QRGQGQLAAD LENALAQFDF AQARALLQNP NPSYNPLKPA VP
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