| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0530 |
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| Symbol | |
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| ID | 4480695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 633933 |
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| End bp | 635306 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639721277 |
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| Product | protease Do |
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| Protein accession | YP_864461 |
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| Protein GI | 117923844 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.61451 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGGAC AGAAGCAAAA ATGGCGGGTG GTTGGGGGCG TATTGGTTGG GTTGGCGCTG
CTGTTGGGCA GTGCTCCCCT GCATGCGGGT GCTTGGCCGG TGGCGGTGGA GGGCGACAAA
CTGCCCACCC TGGCCGATAT GCTGGAGCGG ACCACGCCGG GGGTGGTGAA CATTGCCACC
AGCGGTTCGG TAGAGGTGGC GGAGACGCCC CTGTTGAACG ATCCCTTTTT TCGGCATTTT
TTTGATATAC CTACCATGCG TCGGGCGAAA AAGATCCGCT CGTTGGGCTC GGGGGTGGTG
GTGGATGCCG CGCATGGTTA CATCCTGACC AACCATCATG TGATCGACAA GGCACAGGTA
ATTACCGTGA CCTTGCATGA TGGGCGGGCC TTGAAAGCGG TGCAAGTGGG GGCAGATCCC
GAGACCGATG TGGCGGTGAT TAAGGTAGAG GCGAAGGATC TGCATGCCCT GCCCTTAGGC
AATTCAGATA TCCTGCGGGT TGGGGATTTT GTGGTGGCCA TTGGTAACCC CTTTGGTCTG
GGGCAGACGG TGACCTCGGG CATTGTGAGT GCGCTGGGGC GTAGTGGTTT AGGCATTAAG
GGGTATGAGG ATTTCATTCA GACCGATGCT TCGATTAATC CGGGTAACTC GGGGGGGGCC
TTGGTCAACT TGCGTGGGGA GTTGGTGGGG ATTAACACCG CCATTTTGGC CAAGGGCGGT
GGTAATGTGG GCATTGGTTT TGCTATCCCC GCCAACATGA CCAAGCAGTT GATGGCCCAA
TTGATTGAGT ATGGCGAGGT GCGCCGTGGG CTCCTGGGTA TCTCCAGCCA GGATCTCACC
CCGGAGTTGA ACCAGGCCTT TGGGCTGGAG CATCAACATG GCAGTGTGGT AACCCGTGTC
ACCCGTGGTT CAGCGGCCCA AAAGGCGGGT TTACAAGCAG GGGATATTAT TACCGAGGTC
AATGGTGTGG CGGTGCGCAA TGCAGCCCAT ATGCGCAATT TAGTGGGGCT GCTGCGGGTG
GGGGAGGCGG TGCAGTTAAC CCGTCTGCGG GATGGTCATA GCCGCACGGT CAAAGCGGTG
GTTGAGGCTT CTAAACGGGA GCAGATTGAG GGCAGCCGGT TAAGCCCCCG CCTTGAGGGC
GCTGTGTTGG AAAAAGAGGA GCAGGATGAA AAACCCGGCG TGGTGGTGCG CAAGGTGGTC
CGGGGCAGCA TGGCCGCCCG CATGGGGCTG CAAGAGGGGG ATCGTCTCCT TGAAGTCAAC
CAGCAATCGG TGAAAAATTT GGCCGATATG GGGAAAGCGC TAGCTGTGGA TGGGCGGCAG
ATGCTGCTCA CCTTGGAGCG GGGTGAGCGT CGGATACGGG TGATGGTACG CTGA
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| Protein sequence | MLGQKQKWRV VGGVLVGLAL LLGSAPLHAG AWPVAVEGDK LPTLADMLER TTPGVVNIAT
SGSVEVAETP LLNDPFFRHF FDIPTMRRAK KIRSLGSGVV VDAAHGYILT NHHVIDKAQV
ITVTLHDGRA LKAVQVGADP ETDVAVIKVE AKDLHALPLG NSDILRVGDF VVAIGNPFGL
GQTVTSGIVS ALGRSGLGIK GYEDFIQTDA SINPGNSGGA LVNLRGELVG INTAILAKGG
GNVGIGFAIP ANMTKQLMAQ LIEYGEVRRG LLGISSQDLT PELNQAFGLE HQHGSVVTRV
TRGSAAQKAG LQAGDIITEV NGVAVRNAAH MRNLVGLLRV GEAVQLTRLR DGHSRTVKAV
VEASKREQIE GSRLSPRLEG AVLEKEEQDE KPGVVVRKVV RGSMAARMGL QEGDRLLEVN
QQSVKNLADM GKALAVDGRQ MLLTLERGER RIRVMVR
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