Gene Mmc1_0528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0528 
Symbol 
ID4480693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp632822 
End bp633460 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content62% 
IMG OID639721275 
Productlipoate-protein ligase B 
Protein accessionYP_864459 
Protein GI117923842 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0321] Lipoate-protein ligase B 
TIGRFAM ID[TIGR00214] lipoate-protein ligase B 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.58244 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.525035 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAAC CGCGTGCGGT GGTGGTGGTG CATCGGGATG TCTGGGCGTA TCAGCAGGCA 
TGGGAGCAGC AGTTAGCCTG GGTGCAGGCC ATTCATGAGG GGCAGCGCCA GGATACCCTG
ATTTTATTGG AGCACATGCC GGTCTACACC CTGGGTAAAC GGGCCACGAG GGCGGATGTG
TTGCGGCAGG ATATTCCCGC TGTGTACACC GACCGGGGGG GGCAGGTGAC CTACCATGGA
CCAGGGCAGC TGGTGGTCTA TGTGTTGTGG AACCTGCGTG GTCAGCTACA CGGGGTGCGG
GCCCATGTGG CCCGCTTGGA AGAGATGGTC ATGGAAGTGT TGGCCCACTA TGGTGTGGTG
GGCCAGCGTG ATGGGGCGGG GCCGGGTATC TGGGTGGGGG ATGCCAAGAT TGCCTCCATC
GGGGTACGGG TAACGCAGGG GGTGACGCTG CATGGCCTGA GCCTTAATCG CGATCCTGAT
CTCAGCCATT TTCAGGGGAT TATCCCCTGC GGGCAGGTGG GCAGGCCGGT GACATCGCTG
GCGGCATTGG GGGTGGCGGT ATCCCGTCAG GCGCTGGAGC AGCGCATGGT CGAGGCTTTT
GAAAGGCAGT TTAATGCCCG TTGTTGGGAG GCGTCATAA
 
Protein sequence
MHEPRAVVVV HRDVWAYQQA WEQQLAWVQA IHEGQRQDTL ILLEHMPVYT LGKRATRADV 
LRQDIPAVYT DRGGQVTYHG PGQLVVYVLW NLRGQLHGVR AHVARLEEMV MEVLAHYGVV
GQRDGAGPGI WVGDAKIASI GVRVTQGVTL HGLSLNRDPD LSHFQGIIPC GQVGRPVTSL
AALGVAVSRQ ALEQRMVEAF ERQFNARCWE AS