| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0505 |
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| Symbol | |
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| ID | 4480763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 609374 |
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| End bp | 609907 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639721252 |
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| Product | 16S rRNA processing protein RimM |
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| Protein accession | YP_864436 |
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| Protein GI | 117923819 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGGTA CTGAAGAGAT CCGTTGGGTC ACTCTGGGCT ATGTGATGGG GGCTTTTGGT
CTCAAAGGCG AGATGCGTGT TCGCTCGTTG ACCGAACGGC CCGATGGCAT CTTCGACCAC
CCAGTCTGGT GGCTATTCAA CCCCAAGCAG AAGACGCGGC AAGAGATGCG GTTGGGCTCT
GGGCGGTTGC ATGGCAAGGG TGTGGTGGCC ACTTTGGCGG GTGTTACCAC CCGTGAGGCG
GTGCAGGCAC TGTTCGGTAC AGAGATCCAA GTACCTCGCA GCATGCTCCC GGATGGGGGG
GATGATCCTG GGGTAGATGG TATCTGGGCG GATCTCATTG GCTGCCAAGT GGTTGAGGTG
GATGGTACCG AGCTGGGCCG GGTTGTTGAA ATGATGGCAA CCGGTGCCAA CGATGTACTC
ATCGTACGCG GCGGGCCTGA GGGTGAGAAG CTGCTTCCTT ATATCGAGGA GGTGGTGGTG
GAGCTAGACC TGGACCGGCA GATCATCAAG GTTAAGCTGA TGGAAGGGAT GTAG
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| Protein sequence | MSGTEEIRWV TLGYVMGAFG LKGEMRVRSL TERPDGIFDH PVWWLFNPKQ KTRQEMRLGS
GRLHGKGVVA TLAGVTTREA VQALFGTEIQ VPRSMLPDGG DDPGVDGIWA DLIGCQVVEV
DGTELGRVVE MMATGANDVL IVRGGPEGEK LLPYIEEVVV ELDLDRQIIK VKLMEGM
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