| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0487 |
|---|
| Symbol | |
|---|
| ID | 4482399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 586469 |
|---|
| End bp | 587392 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639721234 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_864418 |
|---|
| Protein GI | 117923801 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGCT ACGTTATCGG ACAACAACTG GTCAATGGAG TGGTGCTCGG CTCCATCTAT
GGCCTTATCG CGGTGGGCTA TACCATGGTC TACGGCATCA TTGGTATGAT CAATTTTGCC
CATGGCGAAA TTTATATGAT CTCTGCCTAC CTGACCGCCA TTACCTTGGC CGTGCTTACA
ACATGGGGCG TCGATTCGGT CTTTCTGGCC CTCATCCTGA CCCTTATCAG CAGCATCGCT
TTTACCGCCC TGTATGGCTG GACAGTGGAG CGTATCGCCT ATCGACCTCT GCGCCGCTCC
ACCCGTTTGG CCCCCTTGAT TTCTGCCATT GGCATGTCAT TGGTTTTGCA AAACTATGTA
CGTTTGGCCC AAGGCAGTCG TAACCAAGGG GTGCCCAGTT TGATGGAAGG TAATCTGCGT
CTGGTGGGGG AGAACCCCGA GCAGTTTGTG CAAGTAACCT ATGTGCAGTT GGTGATCGTG
CTCACCGCTT TGATCAGTAT GGGTATTTTA AGCTGGACGA TCCAAAAAAC CGCGCTGGGG
CGTGCGTGCC GGGCTACGCA ACAAGATCGT GTTATGGCAG AACTGCTGGG GGTGAATACG
GATCGTATTA TCTCTGTGGT GTTTGTGCTG GGGGCATCCA TGGCTGCTGT GGCGGGGGTG
CTGGTTACGG TCAACTATGG CTCGTTTGAT TTTCATGTGG GGTTTGTCAC CGGCATTAAA
GCCTTTACGG CGGCGGTGCT GGGGGGCATC GGCTCCCTAC CTGGGGCGAT GTTGGGGGGG
TTGATTTTGG GGCTGTCCGA GTCGTTTTTT GCGGGGTTTG TCAACAGTGA CTATAAGGAT
GTCTTTGCGT TTTCTATCCT GGTATTGGTG TTGATTTTTA AACCCAGTGG GTTGTTGGGT
CGCCCTGCTG TCGAAAAGGT ATAA
|
|---|
| Protein sequence | MNSYVIGQQL VNGVVLGSIY GLIAVGYTMV YGIIGMINFA HGEIYMISAY LTAITLAVLT
TWGVDSVFLA LILTLISSIA FTALYGWTVE RIAYRPLRRS TRLAPLISAI GMSLVLQNYV
RLAQGSRNQG VPSLMEGNLR LVGENPEQFV QVTYVQLVIV LTALISMGIL SWTIQKTALG
RACRATQQDR VMAELLGVNT DRIISVVFVL GASMAAVAGV LVTVNYGSFD FHVGFVTGIK
AFTAAVLGGI GSLPGAMLGG LILGLSESFF AGFVNSDYKD VFAFSILVLV LIFKPSGLLG
RPAVEKV
|
|---|
| |