| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0486 |
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| Symbol | |
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| ID | 4482398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 585141 |
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| End bp | 586265 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639721233 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_864417 |
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| Protein GI | 117923800 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.853674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCTT GGCTTAAGGG CACCATGGCG GCGGCGGTTG GGGTATGGGG TTTGGCAGCG
GTTGCGGTGC AGGCGGAGGA GATGGTGCGT ATTGGTGTGG CAGGCCCTTT TAGCGGTGCC
TATGCGGCTT TTGGTGAGCA GCAGTGGCGG GGTGCCGAGG CGGCCATTGT CGATATCAAC
CGTGGGGGCG GTATTTTGGG TAAGCAGATT CTGCTCATCA AGGGGGATGA TGCGTGCGAG
CCTAAGCAGG CGATGGCGGT TGCCAACCGG TTGGTGGACA ATGATGAGGT GCAAGCGGTG
GTGGGCCATT TTTGCTCTTC GACCACCATG CCAGCCTCAG AGGTTTATGA TGAGGCAGGT
ATTTTGGTTA TGACCCATGG TTCCACCAAC CCAATGGTGA CGGAGCGGGG TTTAAAGACG
GTGTTGCGCA TGTGTGGTCG GGATGACCAG CAGGGCACGG TGGGTGCGGA GTTTGTGGTG
AAGCGTTTGG GTGCCAAGCG GGTTGCGGTG TTGCATGACA AGGACACCTA TGGCCAAGGT
TTGGCCGACG CCATGAAGGC GCATTTGCAC ACCTTGGGTC TGACCGAGGT TATGTATGAG
GGTTTGACTC GGGGCGAGAA GGATTTTAAT GCGTTGGTCA CCAAAATTAA GGCGGCTAAG
GCGGATGCCG TCTATTTTGG GGGGCTGCAT AGCGAAGCGG GGCCGTTGGT ACGTCAAATG
CGTGAGCAGG GGGTGGATGT ACCGTTGGTC TCTGGGGATG GTATTGTGTC GGAAGAGTTT
GTGACGGCGG CGGGTGGGGG TCGTTTTGTC AAGAATGTCT ATATGACCTT TGGGGCCGAT
CCCCGTAAGA GCCCCGAGGG TAAGGCCTTG GTGGCCCGTT TTCGCGAGGC CGGTTATGAG
CCAGAGGGTT ATACCCTCTA TGCTTATGCG GTGGTGCAGT CCATTGCGGC GGCGATGCAA
GAGAGCGGTT CATATAATGG GGTTGAGTTG GCCAATTGGC TAAAGCGTCA CTCGGTCGAG
ACGGTAATGG GGCCTAAATC GTGGGATGCC AAGGGTGATT TAAAGGTGAG CGACTATGTG
ATGTATCAGT GGGACGAGAA CGGCAAATAT GCCGAGGTCG AGTAG
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| Protein sequence | MKAWLKGTMA AAVGVWGLAA VAVQAEEMVR IGVAGPFSGA YAAFGEQQWR GAEAAIVDIN
RGGGILGKQI LLIKGDDACE PKQAMAVANR LVDNDEVQAV VGHFCSSTTM PASEVYDEAG
ILVMTHGSTN PMVTERGLKT VLRMCGRDDQ QGTVGAEFVV KRLGAKRVAV LHDKDTYGQG
LADAMKAHLH TLGLTEVMYE GLTRGEKDFN ALVTKIKAAK ADAVYFGGLH SEAGPLVRQM
REQGVDVPLV SGDGIVSEEF VTAAGGGRFV KNVYMTFGAD PRKSPEGKAL VARFREAGYE
PEGYTLYAYA VVQSIAAAMQ ESGSYNGVEL ANWLKRHSVE TVMGPKSWDA KGDLKVSDYV
MYQWDENGKY AEVE
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