Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0485 |
Symbol | |
ID | 4482397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 582858 |
End bp | 584951 |
Gene Length | 2094 bp |
Protein Length | 697 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639721232 |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_864416 |
Protein GI | 117923799 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATAAGC GACACGCCGA AACATTGCTG CAAACCATGG TCGGCTCAGC AGAAGCCCAT TTTCGCCCCG GTCAGTGGCA GGCGGTGGAT GCTCTGGTTA ATCAACAGCA ACGACTTATG GTGGTACAAC GCACCGGCTG GGGCAAAAGC GCCGTCTATT TTGTCAGTAC CGCTATCCTA CGCCAACGGG GGGCCGGCCC CACCCTGATC GTCTCGCCCT TGCTGGCCCT CATGCGTAAC CAAGTCCAAG CGGCTGAGCG CCTAGGTATC CGCGCCATCT CCATCAACTC CGCCAATACC GAAGCGTGGG ATGGCCTTCT AGACGACCTC CATGGCGACC GTGTCGATGC CCTGCTCATC TCCCCCGAAC GCTTTAGCAA CCCCCAGTTT GCCGATACCG TGCTACCCCA CATGCTCGAC CGCATCGGCC TGTTTGTGGT GGACGAGGCC CACTGCATCT CCGACTGGGG CCATGACTTT CGCCCCGACT ACCGCATGCT GGTCCATATC ATCCAGCAGC TCCCCCCCAC CACCCCGGTG CTGGGCACCA CCGCCACCGC CAATGATCGT GTGCTGGCCG ATATTCAGGC CCAATTAGGC AACGTGCAGA TCCTGCGCGG CCCCCTTATG CGTGAAAGCC TGCTGCTGCA AAACCTACAT CTACCCGACC AAATCAGCCG CTTAGCCTGG CTCGCTGAGC ATATCCCCCA CCTGCCCCAT AGCGGCATTG TCTACGTGCT CACCAAACGC GATGCCGAAC AGGTCAGCCA GTGGCTTAAC CGGAACCATA TCGCCGCCCT GCCCTACTAT AGCGGGGTGC AGGGCCATGG ATTTACCGAG AGCAACAGCT ATCGACTCTA TCTGGAAGAT CAGTTAATCC ATAATAAAAT TAAGGTGCTG GTGGCGACCT CAGCCTTGGG CATGGGCTAT GACAAGCCTG ACCTTGGCTT TGTCATCCAC TATCAAGCCC CTGGATCCGT CATTAGTTAT TATCAGCAGG TGGGACGGGC GGGACGGGCG CTGGAACAGG CCTATGGCAT TCTTTTTCAT GGTGCGGAGG ATGAGGCCAT CCATCACTAT TTCCGCCAAC AGGCTTTCCC CTCGCCGCAG GAGGTGGAAA CCATTCTTGA GATGTTACAC CAGCACGGTG CCACCACCAC CCGTGGGTTG ATGCGCCATG GCAATTTGGG TTGGGGGGCG GTGGAGAAGG CCCTAAAATA TCTCAGCGTG CAAAAGCCTG CACCGGTAAC GCGTGAGGGC AGCCAGTGGC AGTTAAGCGG CCACCCCTTT AACATGGACC ATGCCCACAT CGACTACCTG ACGAGCCAGC GGGAACTGGA GTGGCAGGAG ATGCAACGCT ATGTACAGAG CCCAACCTGC TTAATGCGCT TCTTACGCAA TGCCTTGGAT GATCCCGATG CCTCCAACTG CGGGCGCTGC GCCGTCTGTC GTGGTCAAGC CATCGTGCCT ACCCGCTGGA GCGCCGCTCA AGCCGCTGCC GCCCGTACGG TCATGCAATC CGACCCCATC ACCTGGGAAC CCAGAAAACA GACGGAAAAG GGGGCCTTTG TCCTCACAAA GCTGGCCACC CACCTGCCCA AAGCGCAACA GGCCCAAGTG GGCCGTGCCC TCTGCCGCTG GCAGCAGGCC GAGTGGGGCC AACTGGCCGC CCAAGGTTAT AAAAAGGGCC ATTTTGCCGA AGCCTTGGTG CAGGCCATGG CCCACATGAT TCAACAGTGG AACCCCCAAC CCGCCCCCAC TTGGGTGACG TGTGTACCCT CTAGCCGCAT GCCCACACGG GTGCCGGATC TGGCCTTACG CTTGGCTCAG CAGCTCAAGC TACCCTTTGC CACCTGCGTC AGCCAAAGCA GGCCCAACGC GCGTCAAAAA ACGATGCGCA ACAGCTTTTA CCAATGCCGC AACCTCGATG GTGTGTTTGC CCTTGGCTCC ATCCCCCACA ACGGCCCGGT GCTGCTGGTG GATGATTTTG TGGATAGCCG CTGGACCTTC ACGGTGGTGG CCGCCCTGCT GGCGCAAGGG GGTGTTCCAC TCATCTACCC TACCGCCATG ATCAGCCTAG AGCAAACGCT TTAA
|
Protein sequence | MDKRHAETLL QTMVGSAEAH FRPGQWQAVD ALVNQQQRLM VVQRTGWGKS AVYFVSTAIL RQRGAGPTLI VSPLLALMRN QVQAAERLGI RAISINSANT EAWDGLLDDL HGDRVDALLI SPERFSNPQF ADTVLPHMLD RIGLFVVDEA HCISDWGHDF RPDYRMLVHI IQQLPPTTPV LGTTATANDR VLADIQAQLG NVQILRGPLM RESLLLQNLH LPDQISRLAW LAEHIPHLPH SGIVYVLTKR DAEQVSQWLN RNHIAALPYY SGVQGHGFTE SNSYRLYLED QLIHNKIKVL VATSALGMGY DKPDLGFVIH YQAPGSVISY YQQVGRAGRA LEQAYGILFH GAEDEAIHHY FRQQAFPSPQ EVETILEMLH QHGATTTRGL MRHGNLGWGA VEKALKYLSV QKPAPVTREG SQWQLSGHPF NMDHAHIDYL TSQRELEWQE MQRYVQSPTC LMRFLRNALD DPDASNCGRC AVCRGQAIVP TRWSAAQAAA ARTVMQSDPI TWEPRKQTEK GAFVLTKLAT HLPKAQQAQV GRALCRWQQA EWGQLAAQGY KKGHFAEALV QAMAHMIQQW NPQPAPTWVT CVPSSRMPTR VPDLALRLAQ QLKLPFATCV SQSRPNARQK TMRNSFYQCR NLDGVFALGS IPHNGPVLLV DDFVDSRWTF TVVAALLAQG GVPLIYPTAM ISLEQTL
|
| |