| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0479 |
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| Symbol | |
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| ID | 4481261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 577410 |
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| End bp | 578162 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639721226 |
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| Product | hypothetical protein |
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| Protein accession | YP_864410 |
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| Protein GI | 117923793 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000314446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGGC ATAGTAAATG GGCCAATATC AAACACCGTA AAGGCGCCCA AGACGCTAAG
CGCGGTAAAA TTTTTACCCG CTTGATCAAA GAGATTACCG TTTCAGCCCG CATGGGCGGC
GGGGATGCCG CTACCAACCC CCGGCTGCGC AGTGCCATCA CGGCGGCACG GGCCCAAAAC
CTACCCAAAG ATACCATGGA CAAGGCCATC AAGCGGGGCA CAGGTGAGTT AGAGGGCGTC
AATTATGAAG AGGTCCGTTT TGAAGGGTAC GGCCCAGGCG GTGTTGCCAT TATTGTGGAT
TGTCTAACCG ATAACAATAA CCGCACGGTT GCCGATGTAC GCCACATCTT CAATAAATAT
GGCGGCAACA TGGGCACCCA TGGCTGTGTG GCCTTTATGT TTGATAAAAA AGGCCAAATT
ATGTTTGATG CCGAGGGTAT CAACGAAGAT GCCATAATCG AAGCGGCGTT AGAAGCTGGA
GCTGAAGATG TGGTCCATGA AGGGGATAGT TTTGAGGTCC TCACTGACCC CAACGATTTC
TCGGATGTGT TGGAAGCCCT AGCGACTGCT GGCTTTGCCA CCCCCAGCGA GGCCGAAGTG
GTCATGCGCC CGCAAAACCT CCAGCAATTA GATGAGCAAC AGGCCAGCAC CATGCTGAAA
CTTTATGAAA AGTTGGAAGA GAATGAAGAT GTGCAAAACA TCTACGCCAA CTTTGACATA
TCCGATGAGA TTATGGAGAC ACTCTCCGCA TGA
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| Protein sequence | MAGHSKWANI KHRKGAQDAK RGKIFTRLIK EITVSARMGG GDAATNPRLR SAITAARAQN
LPKDTMDKAI KRGTGELEGV NYEEVRFEGY GPGGVAIIVD CLTDNNNRTV ADVRHIFNKY
GGNMGTHGCV AFMFDKKGQI MFDAEGINED AIIEAALEAG AEDVVHEGDS FEVLTDPNDF
SDVLEALATA GFATPSEAEV VMRPQNLQQL DEQQASTMLK LYEKLEENED VQNIYANFDI
SDEIMETLSA
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