| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0477 |
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| Symbol | |
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| ID | 4481259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 576260 |
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| End bp | 576874 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639721224 |
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| Product | Holliday junction DNA helicase subunit RuvA |
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| Protein accession | YP_864408 |
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| Protein GI | 117923791 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
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| TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00171 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.61451 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCCC AACTTAAAGG TTCATTAGCG GCCAAACATC CCGACCATGT GGTGATGGAT
GTGCATGGGG TGGGCTACCG GGTGTTTATC TCTCTGGCCA CCTATAATGA GTTGCCTACC
GTTGGGGAAG CTTGTCTGCT TTACACCGTG ACCCATGTGC GGGAAGATGC CTTTTTACTC
TATGGTTTTC ATAGTGAATC CCAGCGCAAG GTGTTTAATT TACTCACCAG TGTGAATGGG
ATTGGCACCA AGCTCGCCTT GGCGGCTCTC TCTAGCCACA CCCCCGAAGC CCTGCTTACC
GCCCTTTCCC GTGAAGATCT TACCCTGCTC TGCACCATAC CCGGCGTAGG CAAAAAGACC
GCGCAACGCA TGGCGATGGA GCTCAAAGAC AAGCTGGGTG CGCTACCCAT GGCGGCCCCT
ACCACGGCCA TTGGTGCAGC CACCATGGCA GCCAACCCGG CGGGTCTGCG CGAAGAGGTT
GCCTCGGCCC TGCTTAACTT GGGCTATAAA CCCCCTCAAG TGGATGCGGC CTTGGCCAAG
CTGTTTAGTG CCGGGGAGAT TACCGACATC TCCGTCGCCC TCAAGGGCGC CCTTAAACTG
CTGGCTCCAG CTTGA
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| Protein sequence | MIAQLKGSLA AKHPDHVVMD VHGVGYRVFI SLATYNELPT VGEACLLYTV THVREDAFLL
YGFHSESQRK VFNLLTSVNG IGTKLALAAL SSHTPEALLT ALSREDLTLL CTIPGVGKKT
AQRMAMELKD KLGALPMAAP TTAIGAATMA ANPAGLREEV ASALLNLGYK PPQVDAALAK
LFSAGEITDI SVALKGALKL LAPA
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