| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0461 |
|---|
| Symbol | |
|---|
| ID | 4483964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 551432 |
|---|
| End bp | 553717 |
|---|
| Gene Length | 2286 bp |
|---|
| Protein Length | 761 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639721208 |
|---|
| Product | small GTP-binding protein |
|---|
| Protein accession | YP_864392 |
|---|
| Protein GI | 117923775 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.981237 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.556808 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGGG AAGAGCTCCT ATCCAAATTG GCACTGGCCC GTCAACAAGG CCTAAAAGCG
CTGGATCTCT CCAGCTTAGA ACTCACCGAA CTGCCCGATG AAATCGGCTT GTGCAGCAAT
TTGGAATCCC TAGACCTCTC TGATAACCGT TTAACAACGC TACCCGTAGC ATTAGGTCAT
CTAGATCGCT TGCAACTTTT GGACCTAAGA GACAATCAAC TCACCGATTT ACCAGAAAAT
CTTGTCAAGT TGCAGCGGTT GGCCTTTCTA CGCCTCGGTA ATAATCACCT CAGCAAACTG
CCCAATGTGG TCTGCCGCCT GAGTGGCTTG CGACGTTTGG TGTTGCGGGG CAACCGGCTC
AGCAGCCTAC CACCCGAGCT CGGCGCCCTA ACCCAGCTCC AAGAATTGGC CTTACATGAC
AATCTCTTGA CTGCCCTGCC TGAGACCATA GATCGCCTGC TCCATCTGGA AACCCTGCTG
CTGCCGGGCA ATCAGTTGCA AACCCTGCCC GAAAGCTTTG CCCGCCTGCC CGCCCTAAAA
CGGCTGGATC TCGCCCGCAA CCGCATTATG GATCTTCCGC CTGAACTGGG CGGACTGCGC
CATTTGGCTT GGTTGGATCT ACACCACAAT AGCCTGCCGG TACCCGAAGC CATTCTTGAT
GAGGTTCAGG AACCCAGCAA AATTATTGCT GCCTACCACA AAGCACTCGC CAGCGAACGA
CGCCATTTGG ATGAAGCCAA GTTGATGGTT TTGGGCGATA GGGGTACCGG TAAATCTTCA
CTGGTGGCGC GGCTGTTAGA TGGCCGCTTT GTAGCGGACA TGCACCCCAC CGAAGGGGTC
TCCCTGCGCA CGTGGCGTTT TTCCGACGGT CAGCGCCGCC TGCGCTTAAA CCTATGGGAT
TTTAGCGGTG CGGATCACTA TTTTGCCGCC CATCCTTACT TTATCACCCC CCAGGGCTTA
ATCCTGCTGG TCATGGATGG CGCTGAACCT GAACCCGAAC GCCGCTTGGC CCGCTGGATG
CGCATCATAC GCTCACTGGC GGGTCGTCAA GCCAGTGTGG CACTCATTTG CCACCGTGCC
GACCGTTTTC CCCTCGAATT GGACTGGAAT GAAATACGCC AACGCTACCC CAGCATTAAG
GTGGCCGTGC GGCGGGCCTC TTCCATGACT GGAGAGGGGA TTGAGTCGGT GCAACAGGCC
ATTACCAAGC TGCTGGATAC CTTTGAACCG GCCCAAGCGT TGTACTGGCG CAGCTGGTTG
GATACAAAAG CGATTGTTGA GGAGATCAAC GAAAGCCATA TTCCCTACCG TTTCTACCAA
GCTTTATGTC GGGAACGCGG CATCCATGAT GGGGATCAAC AGGAGCAGCT CGCCAACCGT
ATGCACTTAC TGGGCAGTGC GGTCTATTTT CGCAACCACC CGCTGGCAGG CTCCACCGAT
GATCTGCTAG ATCCAGCGTG GTTAACCCAA GCGCTTTACC GTCCGCTGGG TTCCAAGCGC
ATCCGCGATA ATGGAGGGGT GTTAGAGCGT AAAGAGTTGG GACAGATTCT TGACCCTGGC
CTGCATGGCA GCAGCAAACA TGCTTTGGTA TTAACGTGGT TGCGCCGTTT TCAAATCTGT
TTTCCGTTGC TCGAAGAGCC TGGTGAAGAG CAGGCCCAAG CCCCCCACGT GGAGCGCTTT
TTATTCCCTG ATCTCTTACC CGTCAACTAC ACTTCGGTGG GCATGAGCCG TGAAACCTTG
GATTTTTCCT ACCACTATGA CCATCTTCCT CCCGCTTTGA TGGGACGCCT GCTGGTGCGC
TTTTATCCCT TTTTACACAG CCGCACCTGT TGGCGGGATG GCCTGTTGTT GGCCTCGGAG
GGGGGTGGCA ACCGTGCTTT GATCCAAATG GATCGTGAAG CGGGCACGCT GCGTATGCGC
ATTTGGGGGC AACCCAAAAT GCGCGCTGTC TTTTTAGCGC TGCTGCGGCT TTCACTGGAA
CGCTTAAACA GCATCTGGTC TGATTTTGAG GTGCAAGAAA AGGTTCCACT GGCCATCACT
GGTGCTGAAG ATGTGGGTTA TCGTCATCTC CATGCCATGC AAAAGGCCGG ACTGGAGCGC
TTTTTACCTG TGGGCGTTAC GGAGCCCATC GCCATCTCCC CTCTGCTTGA AACCCTAGAG
CTCCCCCCCG CGCCGCCCCC CGAATCCCGC CCATTACCCA ACAAACCTGG GCGGGTCACG
TTAAAGCAGC GTTTACAGCA GCGTCGCATG CAAGCGCACG AGCCAACCGC TACACCAACC
CATTAA
|
|---|
| Protein sequence | MNREELLSKL ALARQQGLKA LDLSSLELTE LPDEIGLCSN LESLDLSDNR LTTLPVALGH
LDRLQLLDLR DNQLTDLPEN LVKLQRLAFL RLGNNHLSKL PNVVCRLSGL RRLVLRGNRL
SSLPPELGAL TQLQELALHD NLLTALPETI DRLLHLETLL LPGNQLQTLP ESFARLPALK
RLDLARNRIM DLPPELGGLR HLAWLDLHHN SLPVPEAILD EVQEPSKIIA AYHKALASER
RHLDEAKLMV LGDRGTGKSS LVARLLDGRF VADMHPTEGV SLRTWRFSDG QRRLRLNLWD
FSGADHYFAA HPYFITPQGL ILLVMDGAEP EPERRLARWM RIIRSLAGRQ ASVALICHRA
DRFPLELDWN EIRQRYPSIK VAVRRASSMT GEGIESVQQA ITKLLDTFEP AQALYWRSWL
DTKAIVEEIN ESHIPYRFYQ ALCRERGIHD GDQQEQLANR MHLLGSAVYF RNHPLAGSTD
DLLDPAWLTQ ALYRPLGSKR IRDNGGVLER KELGQILDPG LHGSSKHALV LTWLRRFQIC
FPLLEEPGEE QAQAPHVERF LFPDLLPVNY TSVGMSRETL DFSYHYDHLP PALMGRLLVR
FYPFLHSRTC WRDGLLLASE GGGNRALIQM DREAGTLRMR IWGQPKMRAV FLALLRLSLE
RLNSIWSDFE VQEKVPLAIT GAEDVGYRHL HAMQKAGLER FLPVGVTEPI AISPLLETLE
LPPAPPPESR PLPNKPGRVT LKQRLQQRRM QAHEPTATPT H
|
|---|
| |