| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0448 |
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| Symbol | |
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| ID | 4484011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 539815 |
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| End bp | 540756 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639721195 |
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| Product | hydrolase |
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| Protein accession | YP_864379 |
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| Protein GI | 117923762 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01459] HAD-superfamily class IIA hydrolase, TIGR01459
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000127842 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAAC AGATCATTGG GGATGGTGCG CAGCTGCGGC GGCTTTATCG CAGTTATGGG
CGCTGGTTGA GCCCGTCATG CGGGGGTTTG GGTAAGCGCC CCTTAGAGTC GACCTTTATG
GGGGTGGTGG AACCCTTTAG CACCCTTTTT TTTGATGCGT ATGGGGTACT CTATGGGGGT
TCGGTTGAGC CTGCGGGGGT TGCTCAGGCG ATGGCGTTAC TGCGCAGACA GGATAAGTGC
ATACGTTTAC TTTCGAATAA TGGACACGAG TCTGTACCGG TTATTGTGAG CAAGTTGGCT
GCGGTTGGTC TGTTTTTTGA GCCCCATGAG ATCATTACAT CGGGTATGGT GGTTGCGTCG
TATTTGGCGC GAGGTGGGTT GCGTGGGGCG CCCTATCTCT TGATTGGCTC GGAGCAGAGT
CGTCAGGCAT ACGCGCCGGA GCCTATGCGG TTGGAGCGTC CACCTGGGGA TGCCCGCTTA
GGGCTTGAGC CGCCACGTGT GTTGCTGGTC TGTAGTGATT CGGCCTATTG GGGTACGCCT
TATCAGGCCC ATGTTGAGTC TATTTTAGCG GTGCATCCCT TACCGATGTT GGTGGCGAAT
CCTGATTTGG TGGTACCTTT ACCGGAGGGG GGATGGTTAC CGGTGGCTGG CCATGCGGCG
CTTACTTTGA ACCAACGTTA TGGTGCCGCC TTTATTGGCT TGGGTAAACC ATTTAGACCG
GTGTTTGAGC GGGCCATGGC GTCGGTACCG GGGGTTAAGG CAGATGAGAT TTTAATGATT
GGCGACACGC CCGAAACGGA TATCTTGGGG GCCAATGGCA TGGGGATAAA GAGTTGTTTG
GTGGGGAGCG GTATTTTGGC AAAGATGGAT TTGACATGGT ACGACTACTG TGTCCAGCAG
GGGATTATGC CCGATTTTTA TGTGCCGGCG GTTGCCTGTT AG
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| Protein sequence | MSKQIIGDGA QLRRLYRSYG RWLSPSCGGL GKRPLESTFM GVVEPFSTLF FDAYGVLYGG
SVEPAGVAQA MALLRRQDKC IRLLSNNGHE SVPVIVSKLA AVGLFFEPHE IITSGMVVAS
YLARGGLRGA PYLLIGSEQS RQAYAPEPMR LERPPGDARL GLEPPRVLLV CSDSAYWGTP
YQAHVESILA VHPLPMLVAN PDLVVPLPEG GWLPVAGHAA LTLNQRYGAA FIGLGKPFRP
VFERAMASVP GVKADEILMI GDTPETDILG ANGMGIKSCL VGSGILAKMD LTWYDYCVQQ
GIMPDFYVPA VAC
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