Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0445 |
Symbol | |
ID | 4484008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 534739 |
End bp | 535176 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639721192 |
Product | cyclase/dehydrase |
Protein accession | YP_864376 |
Protein GI | 117923759 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2867] Oligoketide cyclase/lipid transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0136661 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAGA TAAAAATAGA AGAGATCGTT CCCTTCTCAC CCCAACAAAT GTATGACTTG GTGGTCGACG TGGACCGCTA TCCTGAGTTT TTAAATTGGT GCTGCCATGC CCATATTGTT AAACAGGAAG GCAACCAGTT TGAAGCTGAG TTAACCATTA TGTTCAAAGG CATACGCGAA AAATTTCGTA CGTTGGATAA GGTTGTTCCT GGCGAACGGG TCGAGATATC CCTGGTTTCA GGTCCTTTTA AACATCTGAC CAGTTTGTGG GTATTTGAAC CCGTTGAACC CCAAGGTGCA CGCTGCCGGA TCCATTTTAG CATCGACTTT AAGTTTCGTA ACCCCGTTCT TAACATGACC TTGGGGCCTG TTTTTAGCAT GATCTCTAAA CAGATGGTCA GTGACTACCG CAAACGTGCG GCCAAACTCT ATCGATAA
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Protein sequence | MPKIKIEEIV PFSPQQMYDL VVDVDRYPEF LNWCCHAHIV KQEGNQFEAE LTIMFKGIRE KFRTLDKVVP GERVEISLVS GPFKHLTSLW VFEPVEPQGA RCRIHFSIDF KFRNPVLNMT LGPVFSMISK QMVSDYRKRA AKLYR
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