Gene Mmc1_0445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0445 
Symbol 
ID4484008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp534739 
End bp535176 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content45% 
IMG OID639721192 
Productcyclase/dehydrase 
Protein accessionYP_864376 
Protein GI117923759 
COG category[I] Lipid transport and metabolism 
COG ID[COG2867] Oligoketide cyclase/lipid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0136661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAGA TAAAAATAGA AGAGATCGTT CCCTTCTCAC CCCAACAAAT GTATGACTTG 
GTGGTCGACG TGGACCGCTA TCCTGAGTTT TTAAATTGGT GCTGCCATGC CCATATTGTT
AAACAGGAAG GCAACCAGTT TGAAGCTGAG TTAACCATTA TGTTCAAAGG CATACGCGAA
AAATTTCGTA CGTTGGATAA GGTTGTTCCT GGCGAACGGG TCGAGATATC CCTGGTTTCA
GGTCCTTTTA AACATCTGAC CAGTTTGTGG GTATTTGAAC CCGTTGAACC CCAAGGTGCA
CGCTGCCGGA TCCATTTTAG CATCGACTTT AAGTTTCGTA ACCCCGTTCT TAACATGACC
TTGGGGCCTG TTTTTAGCAT GATCTCTAAA CAGATGGTCA GTGACTACCG CAAACGTGCG
GCCAAACTCT ATCGATAA
 
Protein sequence
MPKIKIEEIV PFSPQQMYDL VVDVDRYPEF LNWCCHAHIV KQEGNQFEAE LTIMFKGIRE 
KFRTLDKVVP GERVEISLVS GPFKHLTSLW VFEPVEPQGA RCRIHFSIDF KFRNPVLNMT
LGPVFSMISK QMVSDYRKRA AKLYR