| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0438 |
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| Symbol | |
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| ID | 4484001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 524786 |
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| End bp | 526807 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639721185 |
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| Product | membrane protease FtsH catalytic subunit |
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| Protein accession | YP_864369 |
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| Protein GI | 117923752 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000747191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACGGGT TTTTTAAAAA CCTCTCCCTG TGGCTGGTTA TCGGCCTTCT TATGGTCATG
CTGTTTAATC TGTTTAACAG CCCCCAAGGA CCAGGGCAGA GCATCACATT TTCCGATTTT
TCTGAAATGG TCGCCCAAGG CAAGGTAACA GCAGTTACCC TTGAAGGGCG TACGGTACGC
GGGCTTTCGA CCGATGGTAG CCCTTTTTCA TCGCGCGTGC CGGATAACTA CGATCTTACC
AAGGATCTGC TGGCCCATGG GGTGGATATT GACGTGCGGG AGCCCGAAGG CACCCCCATG
TTGATGCAAA TTTTAATTAG CTGGTTCCCC ATGCTGCTGC TCATTGCGGT GTGGATCTAC
TTCATGCGGC AAATGCAGTC CGGCGGTGGA CGTGGGGCGA TGTCCTTTGG CAAATCCAAA
GCCAAGCTCA TGTCCGATAA GGCGGCGAAA GTAACCTTTC AGGACGTGGC GGGCATTGAA
GAGGCCAAAG AGGAGCTGCA AGAAGTGGTG CAGTTTCTTA AAGATCCTCA TAAATTCCAA
CGGCTTGGTG GTAAAATTCC AAAGGGTGTG CTGCTGGTGG GTCCTCCGGG TACCGGTAAA
ACACTGCTGG CGCGTGCCAT CGCTGGCGAG GCCAACGTGC CCTTCTTTAA CCTCTCTGGT
TCCGATTTTG TGGAGATGTT TGTGGGGGTG GGTGCGGCCC GTGTGCGGGA TATGTTTGAG
CAAGGCAAAA AAAATGCGCC GTGCATCATC TTTATTGATG AAATTGATGC CGTTGGTCGC
CACCGGGGTG CCGGGTTGGG CGGGGGGCAC GATGAGCGGG AGCAGACCCT CAACCAGCTA
TTGGTGGAGA TGGATGGTTT TGAATCGACT GAGGGTGTGA TCATGGTCGC GGCCACCAAC
CGCCCCGACG TGTTGGATCC TGCACTGCTC AGGCCCGGTC GTTTTGACCG TCAGGTGACG
GTGCCTAACC CCGATATTTT GGGCCGCACC CAGATCCTTA AAGTGCACAT GAACAAAGTA
CCCCTGTCGG ACTCGGTGGA TGCCGAGGTG ATCGCCCGCG CGACCCCCGG TTTCTCTGGG
GCCGATCTGG CCAACTTGGT CAATGAAGCC GCCCTGATTG CCGCCCAGTT GGATAAACGG
GTGGTGGAGA TGGAGGATTT TGAGAACGCC AAGGATAAGG TCATGATGGG TAAACCGCGT
CGAAGCGCGG TTATTTCAGA AAAAGAGCGC AAGACAACAG CCTATCACGA AGCCGGGCAT
GCGGTGGTGG CCATGGCACT GGACGGGGCA GACCCCGTGC ATAAAGTGAC CATCATCCCC
CGTGGTCGCG CTTTGGGCCT GACCATGCAA CTACCGTTGG AAGATCGCTA CACCTACTCC
AAGGTGCAGC TAGAACAAAA TATCGCCATC TTAATGGGGG GGCGTCTGGC AGAAGAGTTG
GTGCTCAATC AGCTCACCAC CGGGGCGGGC AATGATATCC AACGGGCTAC CGATCTGGCC
CGTAAGATGA TCTGCTCCTA TGGTATGAGT GACACCTTGG GTCCCCTTAC TTATGGTGAA
AATGAACAAG AGATTTTCCT CGGTCGGGAG ATCACGCAGC ACAAAAGCGT ATCGGAAGAG
ACAGCTCGGC GCATTGATGC AGAGGTATTT GACATCGTTG ATCGCAATTA CAAAAGAGCC
AAACAGATCT TGACCGATAA AATGGAGGTG CTGCACACCA TGGCCCAGGC ACTGTTGGAG
CGCGAAACCA TTGATGCGGA TGAGGTGATT AAGCTCATGG CAGGCGAGCC TGCCGAGACC
GCTTTAAAGC CTTTGAAGAA AAAGGATGAG CGTGCGAACA AGCCAACCCC AACGGTGGCA
GACGATGGGG AACAAGGGGA CCAAACGGCA AAAGATGCAG TGGCAGGGAG TGTCACCCAA
GCAGAGGATG ATGTGGAAGG ATCCACCCGT ACTGCAACAG AGGCATCCAC GCAGGAGGTG
GTATCTAAGG ACACCCCTGA AGGCGATGAT AAGGATAGAT GA
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| Protein sequence | MNGFFKNLSL WLVIGLLMVM LFNLFNSPQG PGQSITFSDF SEMVAQGKVT AVTLEGRTVR
GLSTDGSPFS SRVPDNYDLT KDLLAHGVDI DVREPEGTPM LMQILISWFP MLLLIAVWIY
FMRQMQSGGG RGAMSFGKSK AKLMSDKAAK VTFQDVAGIE EAKEELQEVV QFLKDPHKFQ
RLGGKIPKGV LLVGPPGTGK TLLARAIAGE ANVPFFNLSG SDFVEMFVGV GAARVRDMFE
QGKKNAPCII FIDEIDAVGR HRGAGLGGGH DEREQTLNQL LVEMDGFEST EGVIMVAATN
RPDVLDPALL RPGRFDRQVT VPNPDILGRT QILKVHMNKV PLSDSVDAEV IARATPGFSG
ADLANLVNEA ALIAAQLDKR VVEMEDFENA KDKVMMGKPR RSAVISEKER KTTAYHEAGH
AVVAMALDGA DPVHKVTIIP RGRALGLTMQ LPLEDRYTYS KVQLEQNIAI LMGGRLAEEL
VLNQLTTGAG NDIQRATDLA RKMICSYGMS DTLGPLTYGE NEQEIFLGRE ITQHKSVSEE
TARRIDAEVF DIVDRNYKRA KQILTDKMEV LHTMAQALLE RETIDADEVI KLMAGEPAET
ALKPLKKKDE RANKPTPTVA DDGEQGDQTA KDAVAGSVTQ AEDDVEGSTR TATEASTQEV
VSKDTPEGDD KDR
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