Gene Mmc1_0424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0424 
Symbol 
ID4483911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp506325 
End bp507140 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content53% 
IMG OID639721172 
ProductBeta-lactamase 
Protein accessionYP_864356 
Protein GI117923739 
COG category[V] Defense mechanisms 
COG ID[COG2602] Beta-lactamase class D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAGGT GGCGATTTTG GCAACGTTGT CTTTTTACCC TACACCTACT CTTGGGGGGG 
GCCGTGGGTG CTTGGGCCAA TGATGCCCAA CTGGCCGAGC TCTTTACACA ACAGGGGGTT
AAGGGAACCC TGGTTATCGC CTCATTGGAT GGTGAAAAGC AGTTTGAACA CAACAGCAGC
CGCGCTGCTC AGCGCTTTGT ACCCGCCTCA ACCTTTAAGA TTCCCCATAC CCTGATTGCC
TTACAAGAGA TGGCGATCTA CCCCCAGGAG GTGTTTATTT GGGATGGTCA GCACCGTAGC
TATGCCGCGT GGAACCAAAA TCACACCCTA GCTACCGCCT TTAAGGTCTC TTGTGTCTGG
TGTTATCAAG AGCTTACCAA CCGAATTAGC GGCTTGGCCT ACCAGGATTA TCTGCAAAAA
ATGGCCTATG GCACGGCCAA GCTGGGTCCA GAGTTGTCCA CTTTTTGGTT AAAGGGTGAT
CTAAAGATCA GTGCGCGGGA GCAGGTTACA TTTTTACGGA ACCTTTATCA TCAAGGCTTT
ACCATCGCCC CGCCGTACTA TCACTTGCTC AAGCAGATGA TGCAGGTTGA AAAGACCGAC
CGTTACAGCC TCTATGCTAA AACCGGCTGG GGCAGCGGTG TTATCCCCCA GGTTGGCTGG
TATGTGGGCT ATGTGGAGAG CCCATCGGGG GTATGGTTGT TTGCCCTTAA CATGGAGATA
ACCAACCCCG ATCAGCTCCC CCTACGTCAA CAACTGGTCA TGGCTGGTCT GCGCACCAAA
CAGATTATCG TGGACCACGC AGCCGCCCTG CCCTAG
 
Protein sequence
MFRWRFWQRC LFTLHLLLGG AVGAWANDAQ LAELFTQQGV KGTLVIASLD GEKQFEHNSS 
RAAQRFVPAS TFKIPHTLIA LQEMAIYPQE VFIWDGQHRS YAAWNQNHTL ATAFKVSCVW
CYQELTNRIS GLAYQDYLQK MAYGTAKLGP ELSTFWLKGD LKISAREQVT FLRNLYHQGF
TIAPPYYHLL KQMMQVEKTD RYSLYAKTGW GSGVIPQVGW YVGYVESPSG VWLFALNMEI
TNPDQLPLRQ QLVMAGLRTK QIIVDHAAAL P