Gene Mmc1_0419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0419 
Symbol 
ID4480903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp498020 
End bp498748 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content57% 
IMG OID639721167 
Productmembrane-fusion protein 
Protein accessionYP_864351 
Protein GI117923734 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.900766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGTG GCATCACTCT GGCGGCCTGC TTATGCTGTT GTGGTTTAGC CACGGCAGCA 
CAAGATCTCA CCATTCCGGT TCAGTTGGTA GCGGTGCAGT TTACCACCTT GTCTGCGGAG
TTGCCGGGCA AGATTGATCG CATCACGGTT AAGGAAGGTG AACGCTTTAA GGGTGGGCGG
GTATTGGTGG GCTTTGACTG CACCATCCAG CAGGCGCAGG TGCAGGAGGC GAGCGCGGTG
CTGGCGGCCG CCGAAAAATC CAAGGCGGTA CACAAGCGAC TGTTGGAGTT GCACGCCACC
GGCACGCTGG AGGCCGAAAA GTCGGTTTGG GACGCTGAGG TGGCCCAAGC CAAGCTCAAC
TCAGCTCGTG CCGCAGCCTC CAAATGCATC ATCGTTGCCC CCTTCTCAGG GCGGGTGGCA
GAACAGAAGG CAAGGGCTTT CCAATATGTC CAGGTGGGCC AGCCGATTTT GGACATATTG
GATGATTCAG CCTTTAATGC GGAATTCATT GTGCCTTCAT CGGCGCTGAG CACCCTTAAA
GCAGGTTCCC AACTACAAAT TGTGGTGCAT GAAACCGGCA AGCTCTATCC CGCCAAGGTC
GCTCGTATCG GTGCCAAGAT TGACGCGGTA AGTCACTCCA TGAAGGTGGT GGCGGAAATC
CGTGGTGACT ATCCAGAGTT GGTGGCCGGT ATGACCGGAC GCCTGCAATT CACGCCAATA
CCGCCATAA
 
Protein sequence
MIRGITLAAC LCCCGLATAA QDLTIPVQLV AVQFTTLSAE LPGKIDRITV KEGERFKGGR 
VLVGFDCTIQ QAQVQEASAV LAAAEKSKAV HKRLLELHAT GTLEAEKSVW DAEVAQAKLN
SARAAASKCI IVAPFSGRVA EQKARAFQYV QVGQPILDIL DDSAFNAEFI VPSSALSTLK
AGSQLQIVVH ETGKLYPAKV ARIGAKIDAV SHSMKVVAEI RGDYPELVAG MTGRLQFTPI
PP