Gene Mmc1_0418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0418 
Symbol 
ID4480902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp496468 
End bp497778 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content59% 
IMG OID639721166 
Productmembrane-fusion protein 
Protein accessionYP_864350 
Protein GI117923733 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.989546 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATA ATCCACTGGT CGCATTGCTG GGGTTAGAAG AGCTTGCCCG CAAGGCGGTC 
GACTCTGCCG CGCTGGGCTT TGTTATGGTC AACGATAGTC GGAGATTGGC TCTCTACCGC
CAAGCGGCAC TCTATATTGA TGGAGAGGGG TTAAAGGCGG TATCTGGGGT GACGGGTATC
GAGAAGGGTG CTCCCTTTAC CCTGTGGTTG CAACGGCTGC TCAAGCGCTT TGCCGCTGAA
GATGTCCGTC AATTAGGCCC GCACGACATG GAGGGGAGCG ATAGGCAGGA GTGGTCAGAG
TGGCTGCCCA GCCACGCCCT TTTGTTGCCC TTGGCAGAGC GAGACGGTAA GCGGCTTGGC
GTATTGCTGT TAGCCCGCGA AGAGGCGTGG AGTGAGCAAG AGGTGGCATT ATTGACCCGG
GCCGCCGATT TTTATGGCCA TGCATGGTCG GTATTACATC GGCCATCGCG CTGGGTTACG
TGGAAAAGTG GGTTAATGGC CATCCCAAAA TGGCCTCTCA AACTGGCGGT GGTGATGGTG
GTTGCGCTCT GTATTCCGGT GCGTCTATCG GTGCTAGCCC CCGCCGAGGT GGTACCCCAC
AATCCAGCGG TAATTCGCTC GCCTATGGAT GGTGTGATCC AGCGGGTCCA TGTGCGCCCC
AACCAGTCGG TGGCTGAAGG GGATCTCCTG TTTGAACTGG AACGCACCAT GCTGGCCAGC
AAGCTGGAGG TGGCCAAGAA GGCTTTGGAT ACAGCTAGGG CCGAATTGGA CCAAGCCTCG
CAACAGGCCA TTTTCGACCC TAAGGCCAAG GGTACCCTGG CGGTCATCCG TGCCCGTGTT
GAGGAGCGCA GCGCCGAGGT GGCGCAGCTC GAAGAGCTGC TGGCACGCGC TCAAGTCCAG
GCACCACGGG GTGGTGTTGC GGTGTTGGAC GATCCCACCG AGTGGCAGGG TCGGCCCGTG
GTGGTGGGTG AGAAGGTGTT GGCGGTGGCA TCGCCCCATG ATGTAGAGGT AGAGGCTTGG
TTGGCTCCAG CCGATGTGAT TCAGTTGGAA GAGGGCGGGC CGGTTAGCCT GTTCCTCAAT
GCCGACCCGT TGTCACCGGT CTCGGGAAAA CTGCGCTACA TTACCTACGA GGCTATTCCT
CAAGCCGATG GTACATTGGG CCACCGCGTG CGGGCAGAAC TCAACAAGGG TGAGGCTGGT
CCACGCTTGG GTTTAAAAGG TACGGTCCGT CTTGATGGTC GCCGGGTACC TTTGATCTAT
TGGCTGGGGC GGCGTCCCTT GGCGATCATC CGCACTTTCG TGGGGCTGTG A
 
Protein sequence
MSDNPLVALL GLEELARKAV DSAALGFVMV NDSRRLALYR QAALYIDGEG LKAVSGVTGI 
EKGAPFTLWL QRLLKRFAAE DVRQLGPHDM EGSDRQEWSE WLPSHALLLP LAERDGKRLG
VLLLAREEAW SEQEVALLTR AADFYGHAWS VLHRPSRWVT WKSGLMAIPK WPLKLAVVMV
VALCIPVRLS VLAPAEVVPH NPAVIRSPMD GVIQRVHVRP NQSVAEGDLL FELERTMLAS
KLEVAKKALD TARAELDQAS QQAIFDPKAK GTLAVIRARV EERSAEVAQL EELLARAQVQ
APRGGVAVLD DPTEWQGRPV VVGEKVLAVA SPHDVEVEAW LAPADVIQLE EGGPVSLFLN
ADPLSPVSGK LRYITYEAIP QADGTLGHRV RAELNKGEAG PRLGLKGTVR LDGRRVPLIY
WLGRRPLAII RTFVGL