Gene Mmc1_0415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0415 
Symbol 
ID4480899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp491956 
End bp493428 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content54% 
IMG OID639721163 
Productcysteinyl-tRNA synthetase 
Protein accessionYP_864347 
Protein GI117923730 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0215] Cysteinyl-tRNA synthetase 
TIGRFAM ID[TIGR00435] cysteinyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.148475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAACA AGGAAAACAG TGTGGGTATC ACCATTTACA ACACCCTTGG ACGCAAAAAA 
GAACCATTTG TTCCCATGAT TCCCGGAAAA GTGGGCATGT ATGTGTGCGG CGTAACCGTC
TATGACTACA GCCACATTGG TCATGCACGG GTGATGGTGG TATTTGATGT AATCGCCCGG
CATCTGCGGG TAACGGGCTT TGACCTTACC TATGTGCGCA ATTTTACCGA CATTGACGAT
AAAATTATTA AGCGGGCCAA TGAACGGGGC GAATCAATCC AAACCCTTAC CCAACGCTAT
ATCGACGCCT TTCACCAAGA TATGGCGGCG CTTGGGGTGC AACCGGCGGA TATTGAACCA
AAAGCCACCG AGCATCTGCC CGAGATGATG CAAATGATCG GTACTTTGAT GGATAAAGGG
GTGGCTTACG CCAGTGGCGG CGATGTCTAT TATGCGGTGG AGCGCTTTGC CAACTATGGG
CAACTCTCTG GCAAGGTGCT GGATGAGCAA GAGGCTGGTG CACGGGTCGA GGTAGACAGC
AATAAACAGA ACCCCATGGA TTTTGTCTTA TGGAAAGGGG CTAAGCCGGA AGAGCCGCAG
TGGGACTCCC CTTGGGGTGC GGGCCGTCCC GGTTGGCACA TTGAGTGTTC GGCCATGGGT
ACCAAATATC TGGGTGCATC GTTTGATATT CATGGCGGCG GGCGGGATCT GATCTTTCCC
CACCATGAAA ATGAGATTGC CCAAACCGAA GGGTGTACCG GCCAACATGC GGTGAACTAC
TGGATCCACA ATGGCTTTGT CAATGTGGTC AATGAAGAGG GGGAGTCTGA AAAGATGTCC
AAGTCATTGG GCAACTTTCA CACCATACGG GATCTGTTGG CCCTCTATCC GGGTGAGGTG
CTGCGCTTTT TTATTTTAAA CAGTCACTAC CGCAGCCCAC TGGATTTTAG TTTCTCACTG
CTAGAGGCGG CCAAGGCGGG TCTGGACCGT ATTTATACCG CCCTGCGCAG TGCCCAAGCG
CTGCTGGGCA AGCTGCCCGG TACACCCATT GGAGAGCCCG CCGATGTGCC CGCCGGTGCC
CCCCAAGATT TGGTGGAAAA CTACCTCAAA GCGATGGATG ACGATTTTAA TACCCCACAA
GCCATCGCTT TTCTGTTTGA GGCCGCCAAA ATGCTGAATA CCGCCATCAG CGAACAGAAA
GATCCCGCTG TCATTGCCAC GTGGGCCCGT TTGATCCGGG GTTTGGGGCA TCATTTGGGC
TTAGCGGGTC AAGATCCCGA GCTCTGGTTC CGCAGCGGCA TAGGGGCAGA ACAAGGTCTG
CAAGCCGAGG CGATCGAGGC GCTCATTGCA GAGCGTAGCG CGGCACGGGC TGCCAAAAAT
TGGGCAGAGT CCGACCGTAT TCGCGACACC CTCGCCCAAC AGGGTATCGT GCTGGAAGAT
GGCCAACACG GGACACAATG GAGCCGTAAA TGA
 
Protein sequence
MINKENSVGI TIYNTLGRKK EPFVPMIPGK VGMYVCGVTV YDYSHIGHAR VMVVFDVIAR 
HLRVTGFDLT YVRNFTDIDD KIIKRANERG ESIQTLTQRY IDAFHQDMAA LGVQPADIEP
KATEHLPEMM QMIGTLMDKG VAYASGGDVY YAVERFANYG QLSGKVLDEQ EAGARVEVDS
NKQNPMDFVL WKGAKPEEPQ WDSPWGAGRP GWHIECSAMG TKYLGASFDI HGGGRDLIFP
HHENEIAQTE GCTGQHAVNY WIHNGFVNVV NEEGESEKMS KSLGNFHTIR DLLALYPGEV
LRFFILNSHY RSPLDFSFSL LEAAKAGLDR IYTALRSAQA LLGKLPGTPI GEPADVPAGA
PQDLVENYLK AMDDDFNTPQ AIAFLFEAAK MLNTAISEQK DPAVIATWAR LIRGLGHHLG
LAGQDPELWF RSGIGAEQGL QAEAIEALIA ERSAARAAKN WAESDRIRDT LAQQGIVLED
GQHGTQWSRK