Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0415 |
Symbol | |
ID | 4480899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 491956 |
End bp | 493428 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639721163 |
Product | cysteinyl-tRNA synthetase |
Protein accession | YP_864347 |
Protein GI | 117923730 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0215] Cysteinyl-tRNA synthetase |
TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.148475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATAAACA AGGAAAACAG TGTGGGTATC ACCATTTACA ACACCCTTGG ACGCAAAAAA GAACCATTTG TTCCCATGAT TCCCGGAAAA GTGGGCATGT ATGTGTGCGG CGTAACCGTC TATGACTACA GCCACATTGG TCATGCACGG GTGATGGTGG TATTTGATGT AATCGCCCGG CATCTGCGGG TAACGGGCTT TGACCTTACC TATGTGCGCA ATTTTACCGA CATTGACGAT AAAATTATTA AGCGGGCCAA TGAACGGGGC GAATCAATCC AAACCCTTAC CCAACGCTAT ATCGACGCCT TTCACCAAGA TATGGCGGCG CTTGGGGTGC AACCGGCGGA TATTGAACCA AAAGCCACCG AGCATCTGCC CGAGATGATG CAAATGATCG GTACTTTGAT GGATAAAGGG GTGGCTTACG CCAGTGGCGG CGATGTCTAT TATGCGGTGG AGCGCTTTGC CAACTATGGG CAACTCTCTG GCAAGGTGCT GGATGAGCAA GAGGCTGGTG CACGGGTCGA GGTAGACAGC AATAAACAGA ACCCCATGGA TTTTGTCTTA TGGAAAGGGG CTAAGCCGGA AGAGCCGCAG TGGGACTCCC CTTGGGGTGC GGGCCGTCCC GGTTGGCACA TTGAGTGTTC GGCCATGGGT ACCAAATATC TGGGTGCATC GTTTGATATT CATGGCGGCG GGCGGGATCT GATCTTTCCC CACCATGAAA ATGAGATTGC CCAAACCGAA GGGTGTACCG GCCAACATGC GGTGAACTAC TGGATCCACA ATGGCTTTGT CAATGTGGTC AATGAAGAGG GGGAGTCTGA AAAGATGTCC AAGTCATTGG GCAACTTTCA CACCATACGG GATCTGTTGG CCCTCTATCC GGGTGAGGTG CTGCGCTTTT TTATTTTAAA CAGTCACTAC CGCAGCCCAC TGGATTTTAG TTTCTCACTG CTAGAGGCGG CCAAGGCGGG TCTGGACCGT ATTTATACCG CCCTGCGCAG TGCCCAAGCG CTGCTGGGCA AGCTGCCCGG TACACCCATT GGAGAGCCCG CCGATGTGCC CGCCGGTGCC CCCCAAGATT TGGTGGAAAA CTACCTCAAA GCGATGGATG ACGATTTTAA TACCCCACAA GCCATCGCTT TTCTGTTTGA GGCCGCCAAA ATGCTGAATA CCGCCATCAG CGAACAGAAA GATCCCGCTG TCATTGCCAC GTGGGCCCGT TTGATCCGGG GTTTGGGGCA TCATTTGGGC TTAGCGGGTC AAGATCCCGA GCTCTGGTTC CGCAGCGGCA TAGGGGCAGA ACAAGGTCTG CAAGCCGAGG CGATCGAGGC GCTCATTGCA GAGCGTAGCG CGGCACGGGC TGCCAAAAAT TGGGCAGAGT CCGACCGTAT TCGCGACACC CTCGCCCAAC AGGGTATCGT GCTGGAAGAT GGCCAACACG GGACACAATG GAGCCGTAAA TGA
|
Protein sequence | MINKENSVGI TIYNTLGRKK EPFVPMIPGK VGMYVCGVTV YDYSHIGHAR VMVVFDVIAR HLRVTGFDLT YVRNFTDIDD KIIKRANERG ESIQTLTQRY IDAFHQDMAA LGVQPADIEP KATEHLPEMM QMIGTLMDKG VAYASGGDVY YAVERFANYG QLSGKVLDEQ EAGARVEVDS NKQNPMDFVL WKGAKPEEPQ WDSPWGAGRP GWHIECSAMG TKYLGASFDI HGGGRDLIFP HHENEIAQTE GCTGQHAVNY WIHNGFVNVV NEEGESEKMS KSLGNFHTIR DLLALYPGEV LRFFILNSHY RSPLDFSFSL LEAAKAGLDR IYTALRSAQA LLGKLPGTPI GEPADVPAGA PQDLVENYLK AMDDDFNTPQ AIAFLFEAAK MLNTAISEQK DPAVIATWAR LIRGLGHHLG LAGQDPELWF RSGIGAEQGL QAEAIEALIA ERSAARAAKN WAESDRIRDT LAQQGIVLED GQHGTQWSRK
|
| |