| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0410 |
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| Symbol | |
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| ID | 4480894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 486406 |
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| End bp | 488379 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639721158 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_864342 |
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| Protein GI | 117923725 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1639] Predicted signal transduction protein
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain
[TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.754716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAGCG TGCTGACGCA GGGTGATATT GCCAGTCTGG GTTTGCCAAA TACGCTGTTG
GAGCTGCTGC AATCAACCCG GCTGGAGCGC ACCAATGCTG CCGATGTGGT TGCCATTGTG
GAGCGCTCGC CCGATCTGGC CCAGGCGGTA TTGGATTGCA CGGGAGAAAG TGAGCGGGGC
TTGCATGGGG CGGTTGTGCA GATGGGCTTT AATGCGTTAC GCGCAACCGC ATTAGAACGT
TTGATTTTTA AGCATTTTAT CACGGTTCAA CCCGCAAAAG AGAGCAGTTT TGATCGTATG
ACCCTATGGC GTCACAACCT ATGGGTGGCC TGCGCGTGTC GCCACATTGC CAACCAGGTG
GGTTATGGAG ATTGTGAAGA AGCCTATATG ACCGGCTTGC TGCATGACCT GGGTAAGCTG
CTGATTGATG CCCTAGGTGC GATGGATTAT GCCGCATTGC AAGAGATCTC TATGCGTACC
GATTGGGATG GTGTGACCTA TGAGCGCTCC CTACTGGGGG TGGGGCATGA TGGGGTGGGT
GCCCATACCC TGCATAAATG GGGCATGAAC ACGTCTGTGG TATTGGCGGT GGCGTTGCAC
CATAGCCGCT ATCAGGCCAA GGAGATCGGC CAACAGGCCG CCCAGTTAAC CGCCATTGTG
CAGTTGGCGG ATTTTTTAGC ATGGATCCAA GGGTTGGGTT CTACAGTCCG TGGACAACAC
CCGGTATTAC CACCCGAGGT GAGTCTCTAT TTGCCCCTGA ATCGCGCCGC GTATGCAACC
ATTGTGGAAC AGGTTAATGG TGAGATAAAG CGGATCGCTG CCCATGATGG TATCGACTTT
CCAGATAGCT TGACCTTTAA CCGTAATCTG TTGGATGCAG GCATCTCCTT GGCCCGGGTA
AACACAGAAT TAAAATATGA CAATAGGTTA AAATACCAGC CTAAGCTTGC CGCTGTACCC
CTGCCTTCGC CTGTGCAAGA AACCCTGTTA GCACCACATA AAAGTTTGAT AAAAAAAGAG
ATATTACATA ATACGTTGGA ATCTGTGTGT GCCGCTTTTC AGGTTAAGCG GGGTGTGGTT
TTTCATGTAG ATCCGGTTAA ACGGTGCTTG GTTAATGAGG CCATCTACAG TACCGACAGT
GACTTATTGA TGCCCCTTAA GCATCTGCAA GAGATCCCCC TCAATGATGA GCCAAGCGCT
TTTTTAGAGT GTTTACGGCA ACGTAAGCAG TTTTTGTTAA GCGGTCAAAC ACCTTTAGAA
AAACAGGTGC GCAATCAAAT AGGGGCGCGA CAGATGGCCC TAACCCCCAT TGTGGGGCCT
CAGCGAGCCT ACGGTATAAT CGCCCTGGAT AATGGCCGGG ATGGGGCGGA TCTCAATCTT
GCCGGTTTGG CCTCTCTTAC CCAAGTAGCC CATGAGCTGG GTATGGCCCT GGAGCATGCG
CAACAGCTAC AGATCGCCAA TCAAATGGCT CACCGGGATG CGTTGACCAA ACTCTATAAC
CGTGGCCGCA TTGATGAGAT TGTCCAAGAG GCTTTTCAGC AAGTGCAGCA GCAGGGTGGG
GAGCTCTCTG TGGCCATGTT GGATGTGGAC TTTTTTAAAA AATTTAATGA CACCTTCGGT
CACCAGATGG GGGACAATGT GCTCAAGTTG GTGGCGGCGG TGTTAAAAAA ACTCACCCGA
GGCAACGGTT CGGTGGGGCG CTATGGCGGG GAGGAGTTTA TTGTGGTGCT GCGCGATACC
GATTACCGCG AAGCCGCCCG CTACTGCGAG CGTATCCGTT TGGCGATCTG TCAGGTGGGC
GAAGCCATGG CACGGCGCTA CGCAGGGCGT CCCCTAAGCA TTAGCATAGG TGTCACCTGT
TACGATGCCA GTTTGGTCAG CAAAGATGAA ATGGTCAGGT TGGCCGACCG AGCGCTCTAT
ATGGCCAAAG ATGGGGGGCG CAATCAGGTT ATCGGCTTAA AACCGGGCGG GTGA
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| Protein sequence | MASVLTQGDI ASLGLPNTLL ELLQSTRLER TNAADVVAIV ERSPDLAQAV LDCTGESERG
LHGAVVQMGF NALRATALER LIFKHFITVQ PAKESSFDRM TLWRHNLWVA CACRHIANQV
GYGDCEEAYM TGLLHDLGKL LIDALGAMDY AALQEISMRT DWDGVTYERS LLGVGHDGVG
AHTLHKWGMN TSVVLAVALH HSRYQAKEIG QQAAQLTAIV QLADFLAWIQ GLGSTVRGQH
PVLPPEVSLY LPLNRAAYAT IVEQVNGEIK RIAAHDGIDF PDSLTFNRNL LDAGISLARV
NTELKYDNRL KYQPKLAAVP LPSPVQETLL APHKSLIKKE ILHNTLESVC AAFQVKRGVV
FHVDPVKRCL VNEAIYSTDS DLLMPLKHLQ EIPLNDEPSA FLECLRQRKQ FLLSGQTPLE
KQVRNQIGAR QMALTPIVGP QRAYGIIALD NGRDGADLNL AGLASLTQVA HELGMALEHA
QQLQIANQMA HRDALTKLYN RGRIDEIVQE AFQQVQQQGG ELSVAMLDVD FFKKFNDTFG
HQMGDNVLKL VAAVLKKLTR GNGSVGRYGG EEFIVVLRDT DYREAARYCE RIRLAICQVG
EAMARRYAGR PLSISIGVTC YDASLVSKDE MVRLADRALY MAKDGGRNQV IGLKPGG
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