| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0403 |
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| Symbol | |
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| ID | 4480887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 475137 |
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| End bp | 477728 |
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| Gene Length | 2592 bp |
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| Protein Length | 863 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639721151 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_864335 |
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| Protein GI | 117923718 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCTC CATTATTTCT GTATAATCCC CTTAAAAGCA TCAAAGGATT TATCCTTAGC
ATTGCCGTTG GGGCCACCCT GTTGATGAGT CTTTCCCTCT ACTGGGTCAT TTCAGATATC
TATGAACGCA GTGTACGCAA TGATGCCCGC AAGGTGGCCA CGCTCATGGC CGAGCAGACT
TTTCAATCCA TGTATCAGGT TATGCGCAAA GGTTGGGTAC GCCGCGATGT CGAAGATTTT
ATCGGTGCCC TGCGTCGCAG CGTGGAGGGG GGAGATTACC GTTTAGAGGT GCTACGCGCG
CCCTTGGTAG AAGAGCTGTT TGGCCCTATT CATCAGCCTG CTCTGGATGA AGCTGTGGGC
GAGGTTGTCG GTACGGCTGA ACGCAAACTC ATCGATCAAC CCACCTCCCT ACGCCTTATT
TACCCTTTGC TGGCGCGCGA AGAGTGCCTT AAATGCCACA CCAATGCGAA CGTGGGGAAT
GTGCTGGGGG TGATTGATGT TCAGCAAAAT CTGGTGCCCA TTTTAAGACG CACTCGCGCC
GAGTTTATTA ACACCCTGCT GTGGATTGCA CCCATCCCGC TACTGGCTGC CTTTTTTGTG
GCGCTGTGGA TCCATGGCCG TTTGGTTGGC GCGTTGAACT ATCTACGAGA TCGCATGACC
CGTATTAATA AGGTTAGTGA TCTCACCCAG CTTAATGAGG GCACCCCCCC ACCCACATTT
TGCGAAGTCA GCGAAATTTT AGAACAGATT AATGACTTCT CCAGACGGCT ACAAAGTTTT
GCCGTGGATA AAGAGTTGCT GGAGTTTGAA ATTCGGCTGC TGGAGCGCTT TGTCATTACC
TCGGATGTGG TCAAAGATTG GCAAAACTAT GTCAAACAGC TACTGCTAGA GATCAATCAG
GTCATGAGCA CCTATGCCCT TTTCTCCATC TTTAAGGTGG AGGAGGAGCA GTTTGATCTG
GAAATTTTCT GGCGCGATCC CCCCAGCGCT GACACCCGCA TGGGCATTGA ATCCATTATT
TGCACAGAAT TACAAAAAAA TAACAGCTTC CACGTGGATA GTTCAGTCAC ACGGATCAAC
CACCATGTGG CCCGCCCCGA TGCCTCTGAG ATGGTGGTCA ACCCCGAGGT GTTCCGCCTA
CAAATTAAAT CATTGGTGGT GGAGTTACCC AAAATTGGCG GCATTGTGGG CATTGGTGTG
CATGTGGATC TAACCCGCGA CCCCACCCGC ATCTTGGTTA TGGAGAGCAC CCTTTCCACC
CTGCTGAATG TGGTAGGCTC GGTTAAAGCG ATCTCCAAAT ACACCCGTGA TCTTGAGTTC
TACGCCACCC GCGACCCCCT AACGGGCCTT TATAATCACC GTATTTTGTG GGAGCTGTTA
CGCACCGAGG TTGAGCGTGC CCACCGGCAT AACCATCAAT TTGCGCTGCT GCTGGTGGAC
CTGGATAACT TTAAAACCAT CAACGACAGC CACGGTCACG CCGTGGGGGA TGATCTACTC
ATCGCCTTTG CCGATCAGAT CGGGGCCACC CTGCGGCAGG GGGATATCCT AGGCCGCCAT
GGCGGTGACG AGTTTGTTAT TATGCTGCCC GAGGTTGAAG AGGGGGTCCC CTTTGCCGCC
GCAGAACGCA TCCTCTCTGC CACCGATAAA ATCCGCGTAC AGACCCATGA TGGTCAATCC
ATTGGCATTA GTGCTTCCAT TGGCGTAGCC ATTTTCCCTG ACCACGCCAA CAGTGCCAAA
GACCTCTTTC TGTTTGCCGA TAATATGATG TTCAAGGCCA AGGCCGAAGG GAAACACCGT
TTTACCATAC CCTCTGAAGA GGATGTGGTG GATGCTTTTA AAGAGATTGG TGAAAAGAGC
GCCTTGGTCA TGCGGGCCAT AGAAGAGAAG TGGGTACAGC CCTTTTACCA GCCCATTTTT
GATGGCCACA CCGGGGAAGT GGTGGCCCAT GAGGTGCTCA GCCGCATTCA GGTGCCCGAT
GCCCGTCTCT ACAGCGCCAA CGAATTTATT GAGATTGCCG AACGTCTGGG CGTGGTACAT
AAACTCGACT ATGTGGGGAT GGAAAAGGCC TTTAACCAAG CGGGCCGTGA AGGCTATGAG
GGGCTGTTAT TTATTAACAT GTCCCCCAAA GCGATGGTAC TTAGTGAGTT TTTTCCCACC
GTGAAAAAAA TGATCGAAGC CGCAGGCTTG CAAAAACAGA ACATTGTGTT TGAAATTACC
GAGCGCGACA CCGTACGTAA CCTCAAAAAC CTAGAGATAT TTATCCGCAA CCTGCATGGT
GAAGGGTATA AATTTGCCAT TGATGATTTT GGCTCGGGCT TTTCATCCTT TCACTATCTT
AAACGGTTTC CCATCGACTA TCTCAAAATT GAGGGTGAGT TTATCGCTCA TATGTTGGAT
GATGTAAAAG ATCTTGCCTT TGTGCGTAGT ATGGCTATGT TGGCAAGGGA TCTAGGCATT
GCCACGGTGG GTGAGTTTGT GGAGAGCGCG GCCATTGCCC AAGAGTGTCG CACATCAGGG
GTGAGCCTGC TACAAGGCTA CCACCTTGGG CGCCCCAGTG CTCACTTTAT TACCAACAAG
GTAAAGGTGT GA
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| Protein sequence | MASPLFLYNP LKSIKGFILS IAVGATLLMS LSLYWVISDI YERSVRNDAR KVATLMAEQT
FQSMYQVMRK GWVRRDVEDF IGALRRSVEG GDYRLEVLRA PLVEELFGPI HQPALDEAVG
EVVGTAERKL IDQPTSLRLI YPLLAREECL KCHTNANVGN VLGVIDVQQN LVPILRRTRA
EFINTLLWIA PIPLLAAFFV ALWIHGRLVG ALNYLRDRMT RINKVSDLTQ LNEGTPPPTF
CEVSEILEQI NDFSRRLQSF AVDKELLEFE IRLLERFVIT SDVVKDWQNY VKQLLLEINQ
VMSTYALFSI FKVEEEQFDL EIFWRDPPSA DTRMGIESII CTELQKNNSF HVDSSVTRIN
HHVARPDASE MVVNPEVFRL QIKSLVVELP KIGGIVGIGV HVDLTRDPTR ILVMESTLST
LLNVVGSVKA ISKYTRDLEF YATRDPLTGL YNHRILWELL RTEVERAHRH NHQFALLLVD
LDNFKTINDS HGHAVGDDLL IAFADQIGAT LRQGDILGRH GGDEFVIMLP EVEEGVPFAA
AERILSATDK IRVQTHDGQS IGISASIGVA IFPDHANSAK DLFLFADNMM FKAKAEGKHR
FTIPSEEDVV DAFKEIGEKS ALVMRAIEEK WVQPFYQPIF DGHTGEVVAH EVLSRIQVPD
ARLYSANEFI EIAERLGVVH KLDYVGMEKA FNQAGREGYE GLLFINMSPK AMVLSEFFPT
VKKMIEAAGL QKQNIVFEIT ERDTVRNLKN LEIFIRNLHG EGYKFAIDDF GSGFSSFHYL
KRFPIDYLKI EGEFIAHMLD DVKDLAFVRS MAMLARDLGI ATVGEFVESA AIAQECRTSG
VSLLQGYHLG RPSAHFITNK VKV
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