| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0395 |
|---|
| Symbol | |
|---|
| ID | 4482139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 463990 |
|---|
| End bp | 464877 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639721143 |
|---|
| Product | transglutaminase domain-containing protein |
|---|
| Protein accession | YP_864327 |
|---|
| Protein GI | 117923710 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTACC GGATTAAACA TACCACGCTT TATCAATACA GCGAGCCGGT GACTCTCTGC
CATAACCGGG CAATTCTCAA ACCCAAGGAT GGCATGGGGC AGAAGTGCCA TAAATTTACC
CTGCGCATTG ATCCTGAGCC CGCCATTATG GAGAGCCATA AAGACGCCTT TGGTAACACG
GTGCACTATT TTGAGATCCA CGAGCCCCAC AAGCAGCTGG AGATCACCGC CACCAGCCAG
CTAACCCGTA CCCCGGTGTT GCTACCCCCT ATGGCCATGG AGAACTCTCC TGCGTGGGAG
TCGGTACGCA GCCAGTTTGA TGCCGGTGAT GGTAATGAGG ATATGGTGCA TGTGGCGCTC
TACCGCATGC CCTCACCCAT GATACCGGCA CTGCCGGCAC TGGCTGAGTT GACCGACCCC
ATTTTCACCC CCGGACGCCC CATTCTAGAG GCGACCATGG CCTTTACCCA GGCGATCCAT
GAGGGTTTTA AGTATGACCC CGAGGCCACC ACCATCGCCA CCCCCATCAC GGCGGTGCTG
GCGCAACGGG CCGGGGTGTG CCAGGATTTT GCCCATATTG CGGTGGGTGC TTTACGCCAA
ATCGGTCTGG CCGCCCGTTA TGTGAGTGGC TATCTGGAGA CCTTACCGCC ACCGGGTCAA
CCACGCTTAG AGGGGGCCGA TGCCTCCCAC GCTTGGTTTT CTCTCTATCT GCCGGGTTTG
GGTTGGGTAG ATTTTGACCC CACCAATGGC TGCATGACCG AGAGTCACCA CCTGGTGGTG
GCGGTGGGAC GCGACTATGC CGACGTGCCC CCGGTTAAAG GGGTGGTGAT GGGGGGTTGG
GAGCATACCC TGGAAGTGGC GGTGGATGTG GTCAGGCAGA CGGTTTAA
|
|---|
| Protein sequence | MEYRIKHTTL YQYSEPVTLC HNRAILKPKD GMGQKCHKFT LRIDPEPAIM ESHKDAFGNT
VHYFEIHEPH KQLEITATSQ LTRTPVLLPP MAMENSPAWE SVRSQFDAGD GNEDMVHVAL
YRMPSPMIPA LPALAELTDP IFTPGRPILE ATMAFTQAIH EGFKYDPEAT TIATPITAVL
AQRAGVCQDF AHIAVGALRQ IGLAARYVSG YLETLPPPGQ PRLEGADASH AWFSLYLPGL
GWVDFDPTNG CMTESHHLVV AVGRDYADVP PVKGVVMGGW EHTLEVAVDV VRQTV
|
|---|
| |