Gene Mmc1_0376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0376 
Symbol 
ID4482678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp434356 
End bp435375 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content58% 
IMG OID639721124 
ProductABC transporter related 
Protein accessionYP_864308 
Protein GI117923691 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCAG ATAGACCGTT CAAAGCCAAT CTGATTCGTA AACCGGACCC TCTGGGGTCC 
CAACCTAAGA CATCTCTGGG GGACTGCATG ATTGAAGTAT CCCAACTCAG CCGCGTCTAT
GGCGATTATA CCGCTGTAGA AGCCTGCTCC TTTGCCATCC AGCGGGGTGA GGTGGTGGGG
CTACTGGGCC ATAATGGCGC GGGCAAAACC ACCATCATGA AGATGCTCAC CGGCTTTCTG
GAGCCCACCT CTGGCACCAT TCTTATTGAT GGCTTGGCCC TCAACCGCGA GGCCAACACC
GTGCAGGGTC GCATCGGTTA TCTGCCGGAA AACTGTCCGG TCTGGCCCGA AATGACGGTT
ATGGCCTATT TGGAGTATCA TGCCGATCTA CGGGGCATCG CCGATATTGA CAAACCCCGT
GCCATCGCCC GCGCCATCCG CCGTACCGCC CTGCAAGAGA AGGCGCTGGC CCCCATCGCC
ACCCTCTCCC GTGGCTACCG GCAGCGGGTG GGTGTGGCCC AGGCTATTTT GCATGATCCC
GATATTATTA TTCTGGATGA GCCCACCAAT GGCCTAGATC CTACCCAGAT CCGCCAGATG
CGGGATCTTA TCCGGGAGCT GGCCAAAGAG GCCACGGTGA TTCTCTCCAC CCATATTTTG
CAAGAGGTGC AAGCGGTCTG TGAGCGGGTA TTGATCCTAA AACAGGGCAA GCTGGTGGTG
GATGCTACCC TCGCCACCTT GCAGAGCGGT GGACGGTTAC GGCTCACCAC CGCAAAAACC
GCCCAAGCCA CGCTGGCCTC ACAGCTGGAG AGCGCGCAGA TAGAGTCCCT GCCCAGCACC
GATGGGCTCT ACCACTACGC CCTCAACGTG CCTGCTCAGC AGACACCCCA GATCGCTCAA
GCGGTGGTGG AAGGCGGGTT GGGTCTGCAC GGGCTACATT TTGAAAAACA GAATCTGGAG
TCGCTGTTTG CGCAAATCAA TCAACAGCCG CAGACGCATG GGGAGGTGGG CCATGGATAA
 
Protein sequence
MAPDRPFKAN LIRKPDPLGS QPKTSLGDCM IEVSQLSRVY GDYTAVEACS FAIQRGEVVG 
LLGHNGAGKT TIMKMLTGFL EPTSGTILID GLALNREANT VQGRIGYLPE NCPVWPEMTV
MAYLEYHADL RGIADIDKPR AIARAIRRTA LQEKALAPIA TLSRGYRQRV GVAQAILHDP
DIIILDEPTN GLDPTQIRQM RDLIRELAKE ATVILSTHIL QEVQAVCERV LILKQGKLVV
DATLATLQSG GRLRLTTAKT AQATLASQLE SAQIESLPST DGLYHYALNV PAQQTPQIAQ
AVVEGGLGLH GLHFEKQNLE SLFAQINQQP QTHGEVGHG