Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0376 |
Symbol | |
ID | 4482678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 434356 |
End bp | 435375 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639721124 |
Product | ABC transporter related |
Protein accession | YP_864308 |
Protein GI | 117923691 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCCCAG ATAGACCGTT CAAAGCCAAT CTGATTCGTA AACCGGACCC TCTGGGGTCC CAACCTAAGA CATCTCTGGG GGACTGCATG ATTGAAGTAT CCCAACTCAG CCGCGTCTAT GGCGATTATA CCGCTGTAGA AGCCTGCTCC TTTGCCATCC AGCGGGGTGA GGTGGTGGGG CTACTGGGCC ATAATGGCGC GGGCAAAACC ACCATCATGA AGATGCTCAC CGGCTTTCTG GAGCCCACCT CTGGCACCAT TCTTATTGAT GGCTTGGCCC TCAACCGCGA GGCCAACACC GTGCAGGGTC GCATCGGTTA TCTGCCGGAA AACTGTCCGG TCTGGCCCGA AATGACGGTT ATGGCCTATT TGGAGTATCA TGCCGATCTA CGGGGCATCG CCGATATTGA CAAACCCCGT GCCATCGCCC GCGCCATCCG CCGTACCGCC CTGCAAGAGA AGGCGCTGGC CCCCATCGCC ACCCTCTCCC GTGGCTACCG GCAGCGGGTG GGTGTGGCCC AGGCTATTTT GCATGATCCC GATATTATTA TTCTGGATGA GCCCACCAAT GGCCTAGATC CTACCCAGAT CCGCCAGATG CGGGATCTTA TCCGGGAGCT GGCCAAAGAG GCCACGGTGA TTCTCTCCAC CCATATTTTG CAAGAGGTGC AAGCGGTCTG TGAGCGGGTA TTGATCCTAA AACAGGGCAA GCTGGTGGTG GATGCTACCC TCGCCACCTT GCAGAGCGGT GGACGGTTAC GGCTCACCAC CGCAAAAACC GCCCAAGCCA CGCTGGCCTC ACAGCTGGAG AGCGCGCAGA TAGAGTCCCT GCCCAGCACC GATGGGCTCT ACCACTACGC CCTCAACGTG CCTGCTCAGC AGACACCCCA GATCGCTCAA GCGGTGGTGG AAGGCGGGTT GGGTCTGCAC GGGCTACATT TTGAAAAACA GAATCTGGAG TCGCTGTTTG CGCAAATCAA TCAACAGCCG CAGACGCATG GGGAGGTGGG CCATGGATAA
|
Protein sequence | MAPDRPFKAN LIRKPDPLGS QPKTSLGDCM IEVSQLSRVY GDYTAVEACS FAIQRGEVVG LLGHNGAGKT TIMKMLTGFL EPTSGTILID GLALNREANT VQGRIGYLPE NCPVWPEMTV MAYLEYHADL RGIADIDKPR AIARAIRRTA LQEKALAPIA TLSRGYRQRV GVAQAILHDP DIIILDEPTN GLDPTQIRQM RDLIRELAKE ATVILSTHIL QEVQAVCERV LILKQGKLVV DATLATLQSG GRLRLTTAKT AQATLASQLE SAQIESLPST DGLYHYALNV PAQQTPQIAQ AVVEGGLGLH GLHFEKQNLE SLFAQINQQP QTHGEVGHG
|
| |