| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0353 |
|---|
| Symbol | |
|---|
| ID | 4481213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 406650 |
|---|
| End bp | 407189 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639721101 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_864285 |
|---|
| Protein GI | 117923668 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.276816 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCAA AGCAAAAAAA CCGAAAGATC GGTTGGTTGG TGGCTCTGCT GGTGTTTACC
CCGCTGCTGG CCCAGGCAGA TATCTATAGC TGTCGCGATG CCCAAGGTAT CATTACCCTG
CGCAATTCAC CGTGTGAGAA AAATGAAGCG GTCAACAGCC GCACCTTCAC CGAGCCCGCC
GTCGTCCATC GGCGCGAACC TAAGCTGCGT AAGCGATCAC CGGAAGAGCG AGGCGAGCCA
CCGACTTATG GTTCAGCGGA TGCTCAGTTA AAGGCCAAGC AAGCAGTCAA AAAGCAGATG
GTCCAGCAGC TACACGATGT GGGTGAGCAG GTGATGCAAG AGCCCGAGGT ACTGCGCTCT
ATGCTCAAGT TTAATGCAGA TCCCCACGTG CGGGCACTGT TAAGTGATCC CTTTATGGTG
AAAGCCTTAA AGGAGGGGGA TAGCCGCTAC CTGCAAAACA GCTATGACTA CCGCATGCTG
CTCAAGAGCT ATCCCGATGC GGTCCCAGCC CTGAAAAACC TTGCCACCAA CGGCCAATAA
|
|---|
| Protein sequence | MIAKQKNRKI GWLVALLVFT PLLAQADIYS CRDAQGIITL RNSPCEKNEA VNSRTFTEPA
VVHRREPKLR KRSPEERGEP PTYGSADAQL KAKQAVKKQM VQQLHDVGEQ VMQEPEVLRS
MLKFNADPHV RALLSDPFMV KALKEGDSRY LQNSYDYRML LKSYPDAVPA LKNLATNGQ
|
|---|
| |