| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0348 |
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| Symbol | |
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| ID | 4482878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 401760 |
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| End bp | 402374 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639721096 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_864280 |
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| Protein GI | 117923663 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGAC CCATGAAGCC TCTTTTCATC CTTGCCTTGC TCGGGCTGCT ATGCGCGGTT
CCACCCCCAG CCGCTGCGGA TATCTATGCC TTTATTGATG CCGATGGGGT CATCCATCTC
TCTAACCGTG CCAATGATCC CCGCTACCGA CGTCTCATGC GCATCAACAG CCAGGGCCGT
CGCCTCGCAC TGCCCCAATA TGCCAGCGTA CCCAGCCGGG GTGGGGATGC CAAACGCTAT
GAACAGACCA TCCATAACAT CGCCAAACGG TTCGATTTGG ATGCCGGATT GGTCAAAGCG
GTCATCCAGG CTGAATCGGG CTTTGACCCC AACGTGGTCT CCCACAAAGG GGCCGTGGGG
CTTATGCAAT TAATGCCACA AACCGCCCGT ATTTATGGGG TTTCCGACCG TACAGATCCT
CACGAAAACA TTCTAGCTGG TAGCCAGCAT CTGCGTTATC TCTTGGATAA ATATAAAAAT
AATATTAAAC TCACGTTGGC GGCTTACAAT GCTGGTGAGG GGGCTGTGGA ACGTTACGGT
AATCGTATTC CACCCTTTCG TGAAACCCAA AACTATGTGC GTAAGGTGCT GGCCTTTTAC
CGCGAATTTC GTTAA
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| Protein sequence | MTRPMKPLFI LALLGLLCAV PPPAAADIYA FIDADGVIHL SNRANDPRYR RLMRINSQGR
RLALPQYASV PSRGGDAKRY EQTIHNIAKR FDLDAGLVKA VIQAESGFDP NVVSHKGAVG
LMQLMPQTAR IYGVSDRTDP HENILAGSQH LRYLLDKYKN NIKLTLAAYN AGEGAVERYG
NRIPPFRETQ NYVRKVLAFY REFR
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