| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0331 |
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| Symbol | |
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| ID | 4481748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 380721 |
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| End bp | 383252 |
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| Gene Length | 2532 bp |
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| Protein Length | 843 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639721079 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_864263 |
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| Protein GI | 117923646 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTATG ACGCCAAATT ACCCTGGGGT TGGGCACCGC TATTGGTGTG TTTGGTGGTG
TTGGCGTGGC CTGCGCAACT GTTGGCGAAT AGAGTACCCG ATCCGATCAT CGTTGGGGTG
TATCAGAACA AGCCAATGAT TTTTCTCGAT GAAAAGGGTG AAGTTCAGGG GCTCTATAAG
GATATTTTAG GGATCATAGC CGAACGTCAT GGCTGGCAGT TGGAGTATCG CTATGGCAAG
TGGAGTGCCT TGCTTGAGCA GCTGCAACGT GGCGAAATTG ATCTGCTGGG GGCCATTGCC
TATAGCGATG AGCGGGCTTT GAGCATGGAT TTTGGCAAGC AGAGTTTTTT TGTCAACTGG
GGTCAGGTCT ATACCCGTGA AGAGCGCAAG GTGGCCTCTT TTTTAGATCT ACAGGGCAAA
CGGGTTGGCG TGCTAAAAGG GGATATTTAT GGGCATCGCT TGGCCGAGCT GGTCAAAAAA
TTTGGTGTTT CTATCGAGAT CGTTGGGTAC GACAGTTACA GTTACGTGCT GCATGGTATC
AAGCAGGGCG AGGTGGATGC GGGGGTGGTT AACCGTCTAA CCGGGGGGGC CGAGCAGCAA
CGTTTTGGAC TTTACGGCAC ACCGATCCTT TTTAATCCAG TCGAAGTGAC GGTGGCTGTG
CCCAAGGGTA AAAATATGGC GTTATTATCC GCCATTGAGC ATGATTTGGT GGTGATGAAG
GCGGATAAAG ATTCGGCATT TCATAAGGCG TTTGATCGTT GGTTAGGGAT AGCCAGCAAG
CCAGAGATGC CCTCATGGTA CCGTACGGGT TTTTGGATCA TCATGGTGCT TATGCTGCTT
GGGGTGGGGT GGAATCTTTC CCTACAACGC CGGGTGGTCC TGCAAGCCAA GCGGCTCGAA
CAGGAGGTCG CTGAACGTCA GGATGCCGAG CAGGGGCTGC AACACGCACA CCAGGAGCTG
GAGCAGCGGG TCGATGAGCG TACCCAGGCG TTGGAGGTGA GTGAGCTAAG ATTTCGAACG
CTATTCCATG CGGCACTGGT GCCGCTGTTT CGTTCATCGT TGGATGGTGG ACGGGTGCTA
TTGGCCAATT TGGCCTTGGT AGAGCTGTTT GGTTATAGCA GTGTAGAAGA GATGGTGACG
CTACATGATC CCCTAAAATC TTATGCGGAT CCCCTAATGC GGGAACATTT TATAGATATT
TTAGTGAGAG ATGGGCGGGT AGAGTGTTTG GATGTTGAGT TGGTTCGTCC CGATAGCAGT
CGATTTTATG CTGAGATAAG CGCCATCCAT TATCCAGAAG GAGGCTATCT GGAAGGGGCG
ATAATTGATA TTACCCACCG TAAACGCACC GAGCACGCCT TGATACAGGC CAAGCAGAGT
GCAGAGCGTG CCAATCGGGC GAAAAGCGAA TTTTTAGCGA CGTTAAGCCA TGAGATACGC
ACCCCTTTAA ATGGCATGAT CGGGTTATTA ACAGCCTTAC AAGCGAGTCG GCTCGATGCC
AAGCAGCAGG AGCAAGTGGG CTTGATTAGT CGTTCATCCA ATTTATTATT AGATTTATTA
AATGATATTT TAGATTTTTC CAAGATTGAG GCCGGTGAAT TGGTCTTGGA GCAGATACCC
TTTAGCCCGT TACAGTTGGT GGAGGATGTG TGTGCCTGCT TGTCAGAGCG TGCGCAAGGC
AAAGGGGTTG GTTTGCGCTT GGAGACGCAT GGGTGGATAC CCCCGGGCTT AAAAGGGGAT
GCGGTACGTA TTCGCCAGAT CATGCTTAAT TTGACCAACA ATGCCATAAA GTTTACGCAG
CAGGGTGAGG TGGTACTCCA TCTATGGGGG TTGGAGCAGC AGCCGGTACC CTTACCGAGC
TGGGTCTCCA TGCGGTTTGG TGTGGTGGAT AGTGGAGTGG GCATAGCGGC AAAGGATATG
GGTCGGATTT TTGATCCCTT TTGCCAAGCA GACAGGGTGC TGGATCGTCG CTATAAAGGC
ACGGGCTTAG GGCTATCCAT ATGCAAGCGG CTGGTGGAGG CGATGGGCGG GGAGATCTGG
GCGGAGAGTC AGGAGGGACA GGGTAGCAGC TTTAGGTTTA CCCTTACCTT AGCGTTGGTC
GAACATCTGC CAGGGCAGGC AATGGGGCGT GAATTGGTCC ATGAGGTTTT ACCCATGCGT
ATTTTGTTGG TAGAGGATGA TCCGGTCAAC CAGATGGTTG CGGTAGAGTT GTTAGAGAGT
GCGGGGCACA AAGTGGAGGT TGCGGATAAT GGTGCGTCGG GTTTGGTTAA GGCGCAGGAG
TGCTCCTATG ATTTGGTCTT GATGGACATA CGTATGCCGG GCATGGATGG CATTACGGCG
ACCCGCATGT TACGGGCGTT CGAGCAGGCC GAGGGCAGGG AGCGGGTGCC GGTGTTGGGT
TTGACCGCCG ACACGCTGAA GGAGACCCTG CTGGCTTGTC GTGAGGCAGG CATGGATGAT
GTGCTGACCA AGCCGGTGCG GGTGAATGTG TTAACGGACC GAGTAGCCCG CTTGGGGTTT
GAAAACCCGT AG
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| Protein sequence | MGYDAKLPWG WAPLLVCLVV LAWPAQLLAN RVPDPIIVGV YQNKPMIFLD EKGEVQGLYK
DILGIIAERH GWQLEYRYGK WSALLEQLQR GEIDLLGAIA YSDERALSMD FGKQSFFVNW
GQVYTREERK VASFLDLQGK RVGVLKGDIY GHRLAELVKK FGVSIEIVGY DSYSYVLHGI
KQGEVDAGVV NRLTGGAEQQ RFGLYGTPIL FNPVEVTVAV PKGKNMALLS AIEHDLVVMK
ADKDSAFHKA FDRWLGIASK PEMPSWYRTG FWIIMVLMLL GVGWNLSLQR RVVLQAKRLE
QEVAERQDAE QGLQHAHQEL EQRVDERTQA LEVSELRFRT LFHAALVPLF RSSLDGGRVL
LANLALVELF GYSSVEEMVT LHDPLKSYAD PLMREHFIDI LVRDGRVECL DVELVRPDSS
RFYAEISAIH YPEGGYLEGA IIDITHRKRT EHALIQAKQS AERANRAKSE FLATLSHEIR
TPLNGMIGLL TALQASRLDA KQQEQVGLIS RSSNLLLDLL NDILDFSKIE AGELVLEQIP
FSPLQLVEDV CACLSERAQG KGVGLRLETH GWIPPGLKGD AVRIRQIMLN LTNNAIKFTQ
QGEVVLHLWG LEQQPVPLPS WVSMRFGVVD SGVGIAAKDM GRIFDPFCQA DRVLDRRYKG
TGLGLSICKR LVEAMGGEIW AESQEGQGSS FRFTLTLALV EHLPGQAMGR ELVHEVLPMR
ILLVEDDPVN QMVAVELLES AGHKVEVADN GASGLVKAQE CSYDLVLMDI RMPGMDGITA
TRMLRAFEQA EGRERVPVLG LTADTLKETL LACREAGMDD VLTKPVRVNV LTDRVARLGF
ENP
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