| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0328 |
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| Symbol | |
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| ID | 4481745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 378995 |
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| End bp | 379738 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639721076 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_864260 |
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| Protein GI | 117923643 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACCA CAGGCTGCCG AGCGCTGGTG ACGGGGGCAG GGCGTCGCAT AGGGGCTGCC
ATCGCCTTGG CCTTGGGTGA GGCGGGCATG GATGTGGCGG TACACTACAG CGGTTCAGCG
CAAGGGGCTG AGCAGAGCTG TGCGGCGCTG GCCAAGATGG GGCGGCGGGC CTGCGCTTTT
CAAGCCGACC TAAGCGATTG GGCGCAAGCC GAGGCGCTGC TGCCTCGGGT GGTGGCGCAG
ATGGGGCCGG TGCGGGTGTT GGTCAATAGC GCCGCCATTT TTGAACGCAG TGACCTTGTG
GATCAAAGCC AAGCCCAGTG GCGCCGTCAT ATGGCCATCA ATCTGGAGGC ACCTATGCTG
CTGATGCAGC ACTTTGCGCG TCAGTGGCAA AGCGACCAGC CCCCCGATGG GGCGGGCCGC
ATCGTCAATA TTTTAGATCG CCGGGTGTTG GCACCGCCCC CTGGGCATCT GGCCTATAAT
GCCGCCAAAG GGGCGCTATG GAGCCTTACC CGCGTCGCCG CGCGGGAACT GGCACCGCAT
ATTACGGTCA ATGGTGTGGG GCCGGGACCC ATTTTACCGG CGGCCGGTGA GCCGTTGGAG
CAGTTTGCTA AGGTGATTGC CGCCACTCCT ATGCAGCGGA GTGGAACACC GCAAGAGGTA
GCGGATGCGG TACTCTATTT CATTCAAAAT GGTTTTGTCA CCGGGCAGAT GATCTGTATT
GATGGAGGTG AGCATCTCTT ATGA
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| Protein sequence | MDTTGCRALV TGAGRRIGAA IALALGEAGM DVAVHYSGSA QGAEQSCAAL AKMGRRACAF
QADLSDWAQA EALLPRVVAQ MGPVRVLVNS AAIFERSDLV DQSQAQWRRH MAINLEAPML
LMQHFARQWQ SDQPPDGAGR IVNILDRRVL APPPGHLAYN AAKGALWSLT RVAARELAPH
ITVNGVGPGP ILPAAGEPLE QFAKVIAATP MQRSGTPQEV ADAVLYFIQN GFVTGQMICI
DGGEHLL
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