| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0322 |
|---|
| Symbol | |
|---|
| ID | 4481739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 374290 |
|---|
| End bp | 375474 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639721071 |
|---|
| Product | transposase IS66 |
|---|
| Protein accession | YP_864255 |
|---|
| Protein GI | 117923638 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3436] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000104608 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGC TACCAAAGAC ACTCCCTGAT GACCCTGCCG CTTTGCGGGA AATAATACTT
TCCTTGCAGG CTGAAAATGT CCTTTTACAG GACAAAAGCA AGCGTATGGA GCATGAAGCC
CAGCTTCTGA GGGAGAAGCT GAATATTCTC ATTGCCAAGC GGTTTGGGCG TTCCAGTGAG
AAGAGCGATC CCCGTCAGTT GGGTCTGTTC GATGAGGCAG AAGTGACGGC TGCCGAGGAA
CCTGAAGAGG ATGCCGAAGA GATCCAGGTT CCTGCCCATA GCCGCAAAGT GAAGTCCAAA
GGGCGCAAGC CATTGCCAGA GTGGCTACCC CGGGTGGATA TCATTCATGA GTTGCCTGAG
TCGGCATTGG TTTGTGGCCT GGATGGTCAC CATTTGGTCG AGATTGGCCG TGAGACCAGC
GAGCAACTGG ATATTATTCC GGCCAAGGTG CAGGTATTGC GGCACATCCA GATCAAATAT
GGCTGTCCTC ATTGCAAACA GGGCGTGAAG ACGGCCCCTA CACCCAAACG TCCCATTCCC
AAGGCGTTGG CTACAGCTGC TCTATTGGCC CATGTGGCGG TATCCAAGTA TGCCGATGGG
TTACCGCTCT ATCGACAGGG CGCCATTCTG ACCCGTGCAG GGATTGATGT CTGTCGAACC
ACGCTGGCCA ATTGGATGAT CCAGTGCGGC CAACTGGTGC AGCCGTTGAT CAATCTGATG
CGGGACAAGA TGCTGGATTA CGATATCCTG CAGATGGATG AAACTACGAT TCAAGTGCTT
AAGGAAAAAG ATAAAGTTGC AGCCAGCAAC TCCTATATGT GGGTACAGCG AGGTGGTCCC
CCGGGTAGTC CGGTGATTTT GTTTGATTAC GATCCCACAC GCGGTGCCGA GGTTCCGAAA
CGGCTGTTGG CGGGCTATAA AGGCTGGTTG CAAACGGATG GGTATGCAGG TTATCTGGGT
GTGGGTGCGC AGGAAGATGT GATCCTGATG GGGTGTTTTG CGCATGCCCG TCGTCAATTC
GACGAGGCGA TCAAAGCGTT GGGAAAATCC AAAAAAGGCG TAAGCGCCCA TTTATCCCCA
TCAACTACCC TGCCGGTTCA GCAGCAGATT TCAAATTCCA CGGGAGCAAC AAGTCGAACT
CATCCACGGT TTGCGCTGTG GCGAGGCCCT CAAAGACCTT TGTGA
|
|---|
| Protein sequence | MKTLPKTLPD DPAALREIIL SLQAENVLLQ DKSKRMEHEA QLLREKLNIL IAKRFGRSSE
KSDPRQLGLF DEAEVTAAEE PEEDAEEIQV PAHSRKVKSK GRKPLPEWLP RVDIIHELPE
SALVCGLDGH HLVEIGRETS EQLDIIPAKV QVLRHIQIKY GCPHCKQGVK TAPTPKRPIP
KALATAALLA HVAVSKYADG LPLYRQGAIL TRAGIDVCRT TLANWMIQCG QLVQPLINLM
RDKMLDYDIL QMDETTIQVL KEKDKVAASN SYMWVQRGGP PGSPVILFDY DPTRGAEVPK
RLLAGYKGWL QTDGYAGYLG VGAQEDVILM GCFAHARRQF DEAIKALGKS KKGVSAHLSP
STTLPVQQQI SNSTGATSRT HPRFALWRGP QRPL
|
|---|
| |