Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0311 |
Symbol | |
ID | 4481659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 360992 |
End bp | 362356 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639721060 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_864244 |
Protein GI | 117923627 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCGCT CACTCTACGC GCGCATCAGC ATTCCACTGG TGTTAATCCT GCTGTTGGTC ATGGGCTTGC AGTGGTTAGT GGTCCATCTT GCCTTGCATG GTCTGGTCAA AGAATATGTC GCCAGCCGCT TGGATCATGA TGCGGATAAT CTGTTGGCCC AGCTTAGCAT CACCGCCCAG GGCGTTCACC TTGCGCCGGA ACGGTTGGAC CCCATTTTTT ATAAACCGTG GTCTGGACAC TATTTTCAGA TCGAAGTGGG TGGCCAAACC CTACGTTCCC GCTCGTTATG GGACAAGGCG CTGGTTTTGG AAAAAGTACC GCCAGGGGGG CGTCTGCTGC GTCAGCAGCG TGGACCCGAT CAGGCCCCCC TGCTGGTATT AATACGCGGA TACAGCAAAC AAGGTCAGTC TGTTAACATG GCATTGGCAG AAGATTTTCA GGCCGCTACA CAGATTGTCA CCACCCTGCG CCTGTTTTAT GGTGGCCTCT CCCTGGCGGC GCTGCTGCTG TTACTCTTCT TGGTACGCCA CCATCTACGC CGGGCCTTAA TGCCCCTAGA GAGTGCCGAA GCGCAGTTAC ACGCACTGGA ACATGGCACC TTACAGCGGC TTGACCCCAC CGCCATGCCC CTGGAGCTGC ACCCGTTTGT CCACCAAATT AATAGCCTGC TGGCGATCTT GATGAACCGT TTACAGCGCT CTCGCCAAGC TGCGGGTGAT CTGGCCCACG CTATAAAAAC CCCTTTGGCA CTGCTCAACC AGCTTGCCAA CGATGCCCCT TTTACCCAAC ACCCCAACCT GCAACACGCA CTGCGCACCC AAATCACCAC CATTGCACAC TTGAGTGAAC GCACCTTGGG ATTAGCCCGG CTCTCTGGAG GCCAAGGGCA CGGGGTGTGG CTGGATCTCG CCCATGAACT GAACGGTTTG TTGGAGGTGA TGCGGCAACT GCATCGTGAC CGTGGGCTGA CCTACCATGT TGAGCCCCTT GAGCCCCTTA AAATCCATAT GGATCGTGAA GATCTGCTCA CCCTGCTGGG CAATCTTTTG GATAACGCCA GCCGTCATGC CCGTCACCAG ATCCATTTTG GCGCACAAAC ATCAGCCCAG GTTCTGCAAC TTTGGGTGGC CGATGATGGC CCTGGTATCC CACCCCAAGC CCGTGAACGG CTGCTGCAAC GAGGCATCCA CGGCGATCAA CCCCAGCATG GCCATGGTTT GGGGCTGGCC ATCTGCCAAC AAATCGTGCT CGATTACCAG GGTACCCTAA CCCTCAACCA AGACCCTCAA CTGCTGGGCT TGCAGGTGAT GCTGGAACTA CCCGCCCAGC TTGCCCACCT GGCCCCATCC ACCCCCACCA CCTAA
|
Protein sequence | MSRSLYARIS IPLVLILLLV MGLQWLVVHL ALHGLVKEYV ASRLDHDADN LLAQLSITAQ GVHLAPERLD PIFYKPWSGH YFQIEVGGQT LRSRSLWDKA LVLEKVPPGG RLLRQQRGPD QAPLLVLIRG YSKQGQSVNM ALAEDFQAAT QIVTTLRLFY GGLSLAALLL LLFLVRHHLR RALMPLESAE AQLHALEHGT LQRLDPTAMP LELHPFVHQI NSLLAILMNR LQRSRQAAGD LAHAIKTPLA LLNQLANDAP FTQHPNLQHA LRTQITTIAH LSERTLGLAR LSGGQGHGVW LDLAHELNGL LEVMRQLHRD RGLTYHVEPL EPLKIHMDRE DLLTLLGNLL DNASRHARHQ IHFGAQTSAQ VLQLWVADDG PGIPPQARER LLQRGIHGDQ PQHGHGLGLA ICQQIVLDYQ GTLTLNQDPQ LLGLQVMLEL PAQLAHLAPS TPTT
|
| |