Gene Mmc1_0303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0303 
Symbol 
ID4481651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp350214 
End bp351236 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content55% 
IMG OID639721052 
ProductN5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 
Protein accessionYP_864236 
Protein GI117923619 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03533] protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGGTA AATACAAAAA TCGGGCCAAC CAGACGGATG GCACTAAAAA AAGGACCGAT 
AAAGGTCGCC CAGGCGCACC CCAAAGAGGG GGCCAAAAAA ACCCTCCTGC GCGCACCGTA
ACCGATCCAG CCCATAGTGT GGATGGCTGG TTGCGCCGGA GTACCGCCCG TTTAAAACAG
GCCAAGCTTA GCTATGATAA TGGTCTGCAA GAACCCCAGT GGGAGGCGGA ATATCTGCTG
GCCCATGCCA TGGGTATGGA TTTAGAGCAG TTGGAGCGGC ATAAAACCCA GCAGGTTGGC
CCTGACCAAG CCGCCTATAT GGAGGCCCTA TTACAGCAGC GCATCGAGCA GCGCAAACCG
GTCAACTATA TCACCGGCGA GGCTTGGTTT GCGGGCCACC GTTTTGTGGT GGATGAGCGG
GTGCTCATTC CCCGATCACG CATCGAAAAT GTGCTGGATG ATCCCGATGG TTTGCTGGGT
TTAATGGAAG GCGCCCGCCC GCTTAAGCGC ATGTTGGATC TCTGTACGGG TAGTGGTTGT
TTGGCCATTA CGGCGGCGCT GCACTACCCC TGGTTGCAGG TGGATGCGGT CGATCTTTCT
GCCGATGCAC TGGCGGTGGC GGCGGAAAAT GTCAAGCGTC ATCGGGTGAC CGAACGGGTG
CGTTTGGTGC GCTCTAATCT ATTCGAAAAG TTAACGGGGG CGTGTTACGA TTTGATCCTT
ACCAATCCCC CTTATGTGCC GACGCGCATC TATGCTGGAT TGGCAGCAGA GTACCATCGG
GAACCAAAAA TGGCCCTAGA GGCGGGGGGG GATGGCTTGG ATTTGGTCAT TCCCATTTTA
CAGCAAGCAG CAGAGTACCT TGAACCGGGT GGTATCCTGT TGTGTGAAGT GGGGGATGAT
ACCCAGGAGA TCATGGAACA GCGGTGGCCA GATCTACCGG TCTATTGGCT ACAGTTTCAT
TTTGAGGCCA GCGGTGTTTT TGCCGTAACC CGTGAGCAGC TTTTGGATTG GGATGGGCTA
TGA
 
Protein sequence
MSGKYKNRAN QTDGTKKRTD KGRPGAPQRG GQKNPPARTV TDPAHSVDGW LRRSTARLKQ 
AKLSYDNGLQ EPQWEAEYLL AHAMGMDLEQ LERHKTQQVG PDQAAYMEAL LQQRIEQRKP
VNYITGEAWF AGHRFVVDER VLIPRSRIEN VLDDPDGLLG LMEGARPLKR MLDLCTGSGC
LAITAALHYP WLQVDAVDLS ADALAVAAEN VKRHRVTERV RLVRSNLFEK LTGACYDLIL
TNPPYVPTRI YAGLAAEYHR EPKMALEAGG DGLDLVIPIL QQAAEYLEPG GILLCEVGDD
TQEIMEQRWP DLPVYWLQFH FEASGVFAVT REQLLDWDGL