| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0302 |
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| Symbol | |
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| ID | 4481650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 348623 |
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| End bp | 349684 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639721051 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_864235 |
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| Protein GI | 117923618 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGGTA TTATTGGCAG CGCACCGGCA ATGCGCAAAC TGTTCAAGCT CATCGAGCGG
GTAGCTGCGG CGGATTCCAC CGTCCTTATC CATGGTGAGA GCGGTACTGG TAAAGAATTG
ATTTGTCGGG CTATTCACAA TACCTCTCCC CGTCACAATG GCCCGTTGAT TGCGGTCAAC
TGTGGTGCGA TTCCCGAAGA TTTGTTGGAA TCGGAGCTGT TTGGTCACGC CAAGGGCTCG
TTTACGGGGG CGGTGCGGGA TCGTCCCGGT AAGTTTGTCA CCGCCAACAA TGGCACCATT
TTTCTGGATG AAATTGGGGA TATGTCCCCA AAACTCCAGG TTAAAATGTT GCGGGTTCTG
CAAGAGCGTA TTGTGGAGCC GGTGGGGGCA CTGCGCTCGG TTGAGGTCAA TGTGCGGGTG
ATTGCCGCCA CCCATAAAAA TCTTTCTAAA GAAGTGGAAG AGGGGCGCTT TCGCGAAGAC
CTTTTCTACC GTCTTAATGT GGTACCCATT CAGGTACCGC CTCTGCGTGA CCGTATAGAA
GATGTATCCT CGCTGGTTGA GCATTTTATG GAAAAATGCG CCGCACGCAG CAACTGTCCT
CCTGTCAAAA TTGGTGCCCA AGTGATGTCT ATTTTTCAGC GTTACAGCTG GAAGGGCAAT
GTGCGTGAGT TGGAAAATTT GATGGAGCGG TTGATTGTGC TGGCCGACGA TGAGGTTACG
TTGGACGATC TGCCGGAGAA TATGTTGGAC ACCAGCAACC ATACCGAACC CCGTGCGCAA
GAGGAGCGCA TTCCCGTGCA AGCCTTTAGG GTCGCCTATA ACGACGACGA TGAGGATGAA
GGGGATGGGG AGATGGTCTT GGATGATCGT GAGAGTGTCA CCGACTTTAA CCATCAGGTT
GAGCAATACG AAAATCAACT CATTTTAAAT GCCCTTAATC GAACGGGTTG GAACAAAAAC
AAAGCGGCCC AGCTATTAAA GCTTAATCGC ACCACGCTGG TGGAGAAGAT CAAGAAAAAG
GGGCTGGAAG ACGATAAACA GAGCGAACAA CGGAGCGGCT AA
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| Protein sequence | MNGIIGSAPA MRKLFKLIER VAAADSTVLI HGESGTGKEL ICRAIHNTSP RHNGPLIAVN
CGAIPEDLLE SELFGHAKGS FTGAVRDRPG KFVTANNGTI FLDEIGDMSP KLQVKMLRVL
QERIVEPVGA LRSVEVNVRV IAATHKNLSK EVEEGRFRED LFYRLNVVPI QVPPLRDRIE
DVSSLVEHFM EKCAARSNCP PVKIGAQVMS IFQRYSWKGN VRELENLMER LIVLADDEVT
LDDLPENMLD TSNHTEPRAQ EERIPVQAFR VAYNDDDEDE GDGEMVLDDR ESVTDFNHQV
EQYENQLILN ALNRTGWNKN KAAQLLKLNR TTLVEKIKKK GLEDDKQSEQ RSG
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