| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0301 |
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| Symbol | |
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| ID | 4481649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 345888 |
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| End bp | 348623 |
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| Gene Length | 2736 bp |
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| Protein Length | 911 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639721050 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_864234 |
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| Protein GI | 117923617 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCC AGCCAAACAA ACGGACCAAA CCTTGGGCAG TGCCTGGGTT ATTGCTGTTG
GTGATGGTGC TGTTCATACC GGTACGGGGT TGGGCTTTTT CTACCGAGTT ACAACATGAA
CCTTCACCTT CCGGCAAAGG GGACACCCTT AGCTTCGAGC TGCCGAGCAA CGACCAGTTG
CCCAGTTGGG AGCTGATTCG CCCTAAGGTA TTGCGCTTGA AGGTGCCCAA TTTGCTGGCG
CTACCGCACA CCCGTATTGA TCCTAAAACC ACCCGTTATA TTCGTAATAT CGTGGTTGAA
GAGATTGCCG GTGAGTTGGG GCTTTATATC ACCTTAGAGC TCAAGGTGCC GTTATTGACC
TTTCGGCATC AAGTGACCGA GGCCAAACGG CGGCATCCTT CTCGCTACAT TCTCTATATT
GAACCCACCC CCATGCCTAA CCCGCAGGAT GTCACGCGCA TTCGTGGAGC GCGTATTTTA
CCAGGGGCCG AGGGCACCTT GGTGGTGATT GACCATGTGG GTAGCGCTGA GATCAAAGAT
CAGAATATTG ACCATGCCCA GCACGCCATC CGTTTGCAGT GGCAGGGTGC GGCCATGGAT
AAATTTTGGA TCGCGCCCCA ACCAGCGGGT TTGGTCACCG CCATTCACAC CTACACTTTT
AGCAATGACC TGTTGGAGAT GGAGATTGCC TTTCATCCCC GTACGGGCAG TGTTGAGCTG
CATCAAAATC CCAAGAGCGG CACGCTCATT ATTGAATTAC GTACCCAAAA CATGAAGGAT
GTCAAACGCA AGCAGGATAT TGACACCATT TTGACCAACC GTTTGCAAGC CGTTGCTGAA
GGGCTGCCCT TGCCCTTAAA CCGCATTACC CCGATCTTCA AGCCGTCGTC CGAGGTGGTT
AAGTTGGCGG ATCAAGAGGT GACGGAAGAG TATTTTATGA ACAATGCGCT GGCGGCGGAG
AAGGACCACC AGTATGGCAA GGCGCGGGGG TATCTGGATG CCATCTTACG CACCTTTCCC
CAGACCCAAA ATCGGGAGTT GCTGGCCTTT TATAAGGTTG ATTTGGGCAA AAAAATGCAG
TGGGAGAAGG CGGGCTGGTT GTTGGAGGAG CTCACCGGCG TGCTCAACAC CTACCCCAAC
CACTATCGCT ATCCTGAGTA TCGCCTGCTA CAGTTGCAGT TAATGAATGG TGCCCACCAA
TCTGAGCGGG CGTTAGCCGC CATGAACGAT CCCAACTTGC CCATGAATGA TGCACGGGTG
GTGTTGGAAC AAGCGCGTGC CGAAAAGGGT ATGGGGCATG ATGTGGAAGC GCTGGAGCGC
CTTTACTATC TGCTGGAAAA AATGCCCGAC GCCAATGTGC GTGAACGGGC GGGTGCCTAT
TTTGAATTGG TGGATCTAGA GACCCAGCGT AACCATTTGG AGAAGGCGGT CAAGATTTTA
GAAGAGATTC CTGATCCAGA GATGACCTTC TTGGCCAATG ATCCAGACCG CTACATTCAG
TTGGCGACGG CTTACTACAA CCATAATGAT TTTCCCAAGG CGTTGGATCT CTACATACGC
ATTTTGGATG CCTATCCAGA CACTCCGGCG GTTACACCTT GGGCGATGTT ACGGGCCGCC
ATGTGTTACC GTTTTATGAA CAAAGAGGAT GAGGCCAAGC GACTGCTGGA CCGTTTGGGA
TTGATCTATC CCAACTCTGG TGCGCAGTTA TGGGGGCGCA TTTTCCGGGT AGAGATGGAT
GGCAAGCGGG ATGTTAAAGA GCGTCTCCAG GAGTTGGATG AAATTATTGC GAGCAACCCA
CGGGGTAAAG CGATCTTTGA GGCCTATTTT GCCAAATCGC AGTTACAGGG GGATTCTGGG
GATCATGAGT CCAGTTTAAA GACCCTTAAC TATCTGCTGA CCATGTTGGA TATTGGTTTT
GAGCGCAATC GTGCCAACTT GTTACGTCGT CGTTATCTCC AGGCTGGTAT GGAGCAGGCG
TTGACCCAAC GTCAACCAGA GTACGCCATG TCTTTAGCGG AGACCTATGG CGAGGATTGG
CGTCGTTTTA ATCTGTTTGT GGTGCCTCGT ACGCAGCTGA GCGAGGCATT AATGCGGTTG
GGTCAATATC GTGAAGCGCA GCCGCTGTTG GCGGTCAATG ATGATGTTGA GAGCAAGCGT
TTGCACAAGT TGGCCGATGA TCTGGCCAAT GGCATCTACC CCAAGGTTGA TCAAGATCGG
AGTTTGGTCA ATGAGCGCGA GGCTCGGGTG CGGGTTGCAG AGGCAGAACG CCGCCGCGAG
AAAGAGGATT GGGTGGCCAT TTTGGATCTT CTTAACCGTT TACCGATAAA AGGGTTAAGT
GAAGGAGAGC GGGATGAGCG GCTGCGTTTG TTGGCCAAGG CCGAATCTGA ACGGGGACGT
TTTCCGCAGG CGGTACAAAA TCTAGAAGAT TTGCTTTTTA ATCGACCTAT GGGTGACGGC
AAGGATTATT ACTGGTACGC TACGGTACAA CAGGCATGGC GCGGTGATGA AAAGGCGCTA
CCGGTTTACC GCAAGGTAGC GGATGAAGCG GAGAAGGTAC AATTCAAAGC CTTGGCGTTG
ATGCGTATCG GCGATATTCT ACAGAAACAG CGAAATTTAA CGGAAGCCAA ACAGGCTTTT
GAAAAAGCGG CGGAGCTGGA TCCACAAGCC TCTTGGGCGC CCATGGCGCG TGAGAATGCG
AAACAGCTCG AACTGGTACA GGAAATGGCA CCCTGA
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| Protein sequence | MNAQPNKRTK PWAVPGLLLL VMVLFIPVRG WAFSTELQHE PSPSGKGDTL SFELPSNDQL
PSWELIRPKV LRLKVPNLLA LPHTRIDPKT TRYIRNIVVE EIAGELGLYI TLELKVPLLT
FRHQVTEAKR RHPSRYILYI EPTPMPNPQD VTRIRGARIL PGAEGTLVVI DHVGSAEIKD
QNIDHAQHAI RLQWQGAAMD KFWIAPQPAG LVTAIHTYTF SNDLLEMEIA FHPRTGSVEL
HQNPKSGTLI IELRTQNMKD VKRKQDIDTI LTNRLQAVAE GLPLPLNRIT PIFKPSSEVV
KLADQEVTEE YFMNNALAAE KDHQYGKARG YLDAILRTFP QTQNRELLAF YKVDLGKKMQ
WEKAGWLLEE LTGVLNTYPN HYRYPEYRLL QLQLMNGAHQ SERALAAMND PNLPMNDARV
VLEQARAEKG MGHDVEALER LYYLLEKMPD ANVRERAGAY FELVDLETQR NHLEKAVKIL
EEIPDPEMTF LANDPDRYIQ LATAYYNHND FPKALDLYIR ILDAYPDTPA VTPWAMLRAA
MCYRFMNKED EAKRLLDRLG LIYPNSGAQL WGRIFRVEMD GKRDVKERLQ ELDEIIASNP
RGKAIFEAYF AKSQLQGDSG DHESSLKTLN YLLTMLDIGF ERNRANLLRR RYLQAGMEQA
LTQRQPEYAM SLAETYGEDW RRFNLFVVPR TQLSEALMRL GQYREAQPLL AVNDDVESKR
LHKLADDLAN GIYPKVDQDR SLVNEREARV RVAEAERRRE KEDWVAILDL LNRLPIKGLS
EGERDERLRL LAKAESERGR FPQAVQNLED LLFNRPMGDG KDYYWYATVQ QAWRGDEKAL
PVYRKVADEA EKVQFKALAL MRIGDILQKQ RNLTEAKQAF EKAAELDPQA SWAPMARENA
KQLELVQEMA P
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