Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0277 |
Symbol | |
ID | 4482330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 314696 |
End bp | 314953 |
Gene Length | 258 bp |
Protein Length | 85 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639721026 |
Product | RNA-binding protein Hfq |
Protein accession | YP_864210 |
Protein GI | 117923593 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0264829 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAATA GCCATGCTGG ACACAATGTA CAGGACCCGT TTTTGAACAC ACTACGTCGG GAGAAGGTGC CGGTTACGGT GTTTTTGGTT AACGGTATTA AATTACAGGG GATGATCACC TCCTTTGACA ACTATTGCCT ACTGCTGAAA AACAGTGTGA CGCAGTTGGT GTTCAAGCAT GCCATATCAA CGGTTATGCC ATCGCGCAAC ATCCATATGG GTGATGAGCG TGATGATGCT AAAGAGAGTA AGGAATAA
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Protein sequence | MGNSHAGHNV QDPFLNTLRR EKVPVTVFLV NGIKLQGMIT SFDNYCLLLK NSVTQLVFKH AISTVMPSRN IHMGDERDDA KESKE
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