| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0269 |
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| Symbol | |
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| ID | 4482322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 305406 |
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| End bp | 307061 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639721018 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_864202 |
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| Protein GI | 117923585 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAGA CACCCAATGA TGCTGAAGGC GGAGCCTCGG CAGAAGAGCC CTCCCTGGGT
GGGCTATTTG GTAGTTTGCC CTTAACGGGG CGTAATGGCG TTATCATTGC CGCAATGGCG
TCAGTATTCA TCTTGGCGGC GATCATCTGG TTTGCCACAC GGCCTTCCAT GAAGGTGCTC
TACTCCGGCC TGCCGGATCT GGAGAGTGCC CGCATTGTGG AGCAGCTGGG CAAGCTGGGT
GTCCCTTATG AGCTGGGCAG CGGGGGTACC ACCATCCGCA TCCCTGAAGA TAAGGTCTAC
GATGTGCGAC TGGAGATGGC CAAAGCTGGC CTACCCAAGA GCACCGACGG GGTAGGCTTT
GAGATCTTCG ATAACCAGAG TTTGATGGGC ATGACCGACT TTGTGCAGCG CATGAACTAT
CAACGCGCGT TGCAAGGGGA GCTGGCCCGT TCGGTGGAGA GCATTGCGGC TGTAGAAAAG
GCGCGGGTAC ACCTGGTTTT ACCGAAAAAG TCCATGTTTG CAGCCGAAGA GCGCACCGCC
ACTGCATCGG TGGTGATGGA GCTTACCCAC GCTCTGAACA AGACCCAGAT TGATGGCATC
ACCCACATGG TGGCCAGCGC GGTAGAAGGG TTGAGTCAAG ATCAAGTGAC CCTGCTGGAT
CAAAAGGGTA ATCTGATTGC GGGCGGTAAG ACCGAAGATC TGGATGGGCG CATGCCCACG
GATGATGCTT TGGCACTGCA AAGCATGAAA GAGAAGAAGA TTGAAGAGCG GGTGCAGAGC
CTGCTGGATC GGGTATTGGG TCCAGACAAG TCCATTATCC GTATTACCGC TGAGTTGGAT
CTGGACAAAA AGCAGCGTCA AGAGGAGTCC TATGATCCCG ATGGTCAGGT GCCGCTAAGC
ACCAATACGG TTACGGAATC CAGCCGTGGC ATGTTTGGCA CCGGTGGCGT CCCTGGGGTG
ATCCCCAACG ATCCCAACCA GACGGCGGTG GCCGGTGGTA CCGGCTCGCA GCAGACGCGG
GATGTGGAGC GTGAGCAGGT CAACTTCTTG GTACCCAAAA AGGTTACAAC GGTACAAGAA
GCGGTGGGTG ATATTCGTCG TCTTTCCGTG GCGGTGATGA TTGATGGCAC CTACGAAGCG
GTTAAGGATA AGGATGGTAA CATTGATCCT GAAAAGCCAG CGGTCTATAC GCCGCGCTCG
ACAGAGGAGA TGGAGCAGCT CAAGCGTATC ATCATGCAGA CGGTGGGTTT TGACGCCAAG
CGTGGGGATA GTATTGAGGT AACCAATACC GCCTTTGAGC CGCTGCCACC ACCCTTGGAT
GTGAAGAGCC CCTGGTTGTC GCGGGAGTTC CAGTTGGAGA TGGCCAAATA TGGTGCCATT
GCCCTGCTTG CTTTCCTGCT GGTGTTCTTC GTCATGCGTC CGCTGGTGAC CAAGCTGCTG
ATCCCCGAAG AGGAGCAGGA CGACCGCCTG CCCGGTACGG TTGCAGATTT GGAACGGCAG
TTGCTAGCTG AAGGTGTAGG CACGATTCCG GTCGATTCGC CCATACGCAT GAAGATTCCT
GATCGGAGCC TACAGTTGGC CCAGCAGATG ATTGCGGATA ACCTGGAAGA GGCCCGTGAG
ATCATCCGCT CTTGGATGGC GCAGGATAGC TACTAA
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| Protein sequence | MAETPNDAEG GASAEEPSLG GLFGSLPLTG RNGVIIAAMA SVFILAAIIW FATRPSMKVL
YSGLPDLESA RIVEQLGKLG VPYELGSGGT TIRIPEDKVY DVRLEMAKAG LPKSTDGVGF
EIFDNQSLMG MTDFVQRMNY QRALQGELAR SVESIAAVEK ARVHLVLPKK SMFAAEERTA
TASVVMELTH ALNKTQIDGI THMVASAVEG LSQDQVTLLD QKGNLIAGGK TEDLDGRMPT
DDALALQSMK EKKIEERVQS LLDRVLGPDK SIIRITAELD LDKKQRQEES YDPDGQVPLS
TNTVTESSRG MFGTGGVPGV IPNDPNQTAV AGGTGSQQTR DVEREQVNFL VPKKVTTVQE
AVGDIRRLSV AVMIDGTYEA VKDKDGNIDP EKPAVYTPRS TEEMEQLKRI IMQTVGFDAK
RGDSIEVTNT AFEPLPPPLD VKSPWLSREF QLEMAKYGAI ALLAFLLVFF VMRPLVTKLL
IPEEEQDDRL PGTVADLERQ LLAEGVGTIP VDSPIRMKIP DRSLQLAQQM IADNLEEARE
IIRSWMAQDS Y
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