Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0259 |
Symbol | |
ID | 4483579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 293060 |
End bp | 294250 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639721008 |
Product | alanine racemase |
Protein accession | YP_864192 |
Protein GI | 117923575 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.060575 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTACCTC CAACCCTGGC ATACACCACC GCAAACCCTA TGCAATGGAC CCATCGCCCC ACATGGTTGG AAATCGACCT CGCCGCCCTA CGCCATAACC TCCGCCAAGC CCGCACCGCT ACCGGACCCC AAGTCGCCCA CTTTCCCGTC ATCAAAGCCG ACGGCTACGG CATCGGCGCC ATCGCCGTCG CCCACACCCT CGAAGAAGAG GCCGACGGCT TCTGCGTGGC CCTGGTCGAA GAGGCCGAAC AACTGCGCAC CGCCGGAATT AATAAACGCA TCATGCTCTT CTCAGGACTC TACCCCGGTC TAGAAGAACG CGCCATCCGC GCCCGTGTTG AACCCTTCCT CAGTGACGAA ATCAACCTAA ACGCTCTGTG GCAAGCCGCC AAATGCTACG GCCCAATCTC CGTGCATATC AAAATAGATA GCGGCATGGC CCGCCTCGGT TACCACCCCG AACACGTGCC GAGCCTATTA GATCAACTCG CCCATATGCC CGAACTTAAA TTGGCCGGCC TGGTTTCTCA TATGGCCTGT GCCGATGACC GTCACTCCCC CATCACCAAT GCCCAGTTGG CGACCTTAAG CCCCATACTT GAACACCCCC TGGTTAAACA AACACAAGCC CAACTCTCCC TAGCCAACTC CGCAACCATC CTCGGCCACC CCAACGCCCA CTACCAATGG GTACGCCCCG GTATTATGAT CTACGGAGCC TCCCCCTTCT TTCCCCATAC CAATGCCGCC AACGAAGGAT TGCAACCCGT GGTGCGCTGG GTCACCCATA TCCAACGCAT TCACACCCTG GAAAAAGGTA AATCCCTTGG CTACGGCCAC ACCTTTACCG CCACACGCCC TACCCGTATC GCACAACTGC CCGTCGGCTA CGCCGATGGC TATAACCGCC TGTGGAGTAA TAAAGGTTCC GTGTTGATCG CAGGCCAACA CTGCCCCGTG GTGGGGATCG TCTGCATGGA TCAAATCGCC GTGGATATTA GCGATCTTCA AGGTGAGGTC AAACAGTGGG ATGAAGCGGT ACTACTGGGA AAACAACACA ATGCTGAAAT CACCCTGGAA AACTGGGCAA CCGAACTTAA AACCATTCCA TACGAAATCC TGACCCGCAT TGGGCCAAGA GTGCCCCGAC GCTACCGCGA TGGTAGCATC CTGTCAGGCA GCTTTGGCTA A
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Protein sequence | MLPPTLAYTT ANPMQWTHRP TWLEIDLAAL RHNLRQARTA TGPQVAHFPV IKADGYGIGA IAVAHTLEEE ADGFCVALVE EAEQLRTAGI NKRIMLFSGL YPGLEERAIR ARVEPFLSDE INLNALWQAA KCYGPISVHI KIDSGMARLG YHPEHVPSLL DQLAHMPELK LAGLVSHMAC ADDRHSPITN AQLATLSPIL EHPLVKQTQA QLSLANSATI LGHPNAHYQW VRPGIMIYGA SPFFPHTNAA NEGLQPVVRW VTHIQRIHTL EKGKSLGYGH TFTATRPTRI AQLPVGYADG YNRLWSNKGS VLIAGQHCPV VGIVCMDQIA VDISDLQGEV KQWDEAVLLG KQHNAEITLE NWATELKTIP YEILTRIGPR VPRRYRDGSI LSGSFG
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