| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0253 |
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| Symbol | |
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| ID | 4483573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 284969 |
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| End bp | 287230 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639721002 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_864186 |
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| Protein GI | 117923569 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.34378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.702738 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAAGGGT GGGATACCAT CTATGAGGGT GTTATCAGCT ATCATGCTGA GGCCGACCTG
TCACCGCTGA AAAGGGTTGT GGATCTGTTT GAGGAGATTC AATGGCCCGC CGAGACAATA
GATAGAGACT CCCCGATTCA TCCCCTGGTT ATTGCCAAAA CCCTCTTAAA AATGCGCATG
GATGTTGCCT CTCTAGCCTG TGCGCTGTTG GTCCACCCAT ACAGCCAGCG ACGCTTTGAG
CTGGATACCG TCAAACAACG TTTTGGCGAT GATATTGCCT TTTTGCTAGA GGGTATCTCC
CGTATTTCCC TGCTCTCCTT ACGTACCCCT GAAAAAAAAC AAAAAGAGAC GACCATCGAG
GAACCCGAAG AGGGAGCATC GCTGGAGGAT GGGCCACCGA CCCCCCGCAG TGTGGGGGAG
ATGATTGGTG AGATTCATCA CGGCACGATT TTGGTGCGGG ATGAAAATCA GGCGGAAGGT
TTTCGTAAGC TGGTTTTGGC CATGGCCAAG GATATTCGGG TAATATTGAT TCGCTTGGTG
CTTTGTTTGC ACCAATTGCG TTTGGCCATG CGCATGGGTC CGGTGGCATC GGTGGCGAAT
CTCTCCCACG AGGTAATGGA GATCTATGCG CCCATAGCCC ACCGGTTGGG GGTCTATTGG
CTGAAAAATG AGTTGGAGGA TCTGGCCTTC CGCATGCAGT GGCCGGGGCA GTATGACGCC
ATTCGCGCCA AGGTGTTAGA GCGTCGCAAG GGTGGTGAGG ATGTGGTGCA GAAGGTGATC
GCCATTTTGG GAGATAAGCT GGTCAGCCAC CATATTCAGG GTCAAGTGTT TGGTCGCGAA
AAGCATCTTT ATTCGGTGTG GAGCAAGATT AACCGCAAAC AGATCACCCT AGACGATATG
TTTGATCTGA TTGCGTACCG CATTATTGTT CCGAATAAAG AGGATTGTTA TCGAACGCTG
GGTATGATCC ACAGCGAATT TAAGCCGATC CCCGGGCGTT TTAAAGATTA TGTGGCCATC
CCCAAACGCA ACGGTTATCA GTCGCTGCAC ACGGTGGTAT TTGGTCCCTT TGGCAACCGA
ATTGAGATAC AGATACGTAC CGAAAAAATG CACCAGATTG CCGAAAGCGG GGTGGCGGCG
CACTGGAGCT ACAAGGGTAA AGGGGGGGGT GGCAACAGCA CCACCGGTTA TGCGTGGTTA
AAAGATCTAC TGGCCCTACA AGAGAGCGTG GATGATCCAG GTCAGTTTGT GGAGAACGTG
CGCTTTGATC TCTTTCCAGA AGAGATTTAT GTCTTTACGC CAAATGGAGA AATTATCACC
CTACCCAGTA AAGCAACACC GGTTGATTTT GCCTATGCGG TACACTCGCA AGTGGGTAAT
AGCTGTCAGG GGGCTAAAAT CAATGGCCGT ATTGTACCGC TAAAAACCCC TTTGGTGACG
GGGGATACCA TCTCCATTAT CACGGGTAAA AATCGCGAGC CCAACCCCAA CTGGTTGCAG
TTTGTGGTGA CCTCCAAGGC CAAATATTGG ATAGGCCGCT TTGTCAAAGA GAAGCAGCGC
CAGCAATCCA TTGGTCTGGG TCGGGAGATA CTGGAACGTG AGGGGCGCAA GGTAGGTAGT
TCCATCACAG AAAAACAGCT ACGTGTTGTG CTGGAAACCT TCCGCTGTGA AAATATTGAT
GATCTTTACT ATAACATCGG TATCTCGCGG GTTTCGGCCT TACAGGTGGT GCACAAGCTC
TTTCCGGGCA GTGCGCCAGC GTTTACCGAG CGTAAGAACC AAGTAGCACG GGCCGGGGTA
GAGAGACGCG GAGATAAACT GGCGCTCACT GGGGCGTTGG AGGGTATCGC CGTGCAAGCG
GCCCGCTGTT GCAGTCCCCT ACCGGGGGAT GTGGTGGTGG GTATTATCAA TACAGGGCGG
GGCATTACGC TACACCGCAT CAGTTGCAAC AACCTCAAGA GTATGGAAGA TCAACCGGAG
CGCTGGGTAG AGGATATTAA TTGGGGTGGG GATAAGCTAC TGGCTCACAC GGCGCGCATT
CGTGCTATGG TGAGTAATCG GCGTGGTCTG CTTACCCCCA TCAGTCAGGT GATTACCGAG
GCCAAGGCGA ATCTGTTGGA TGTGCATGTG CAGGATCGCG ACCGCGATCC CTGCATGGTG
GTTTTGGAAG TAGAAGTCAT CAATCATGAC CACCTAGAGC GTGTTTTGGC GAACCTGCGT
TCTGTACCCG AGGTGCGGAG TGTGGATCGT ATGAATGCCT AG
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| Protein sequence | MQGWDTIYEG VISYHAEADL SPLKRVVDLF EEIQWPAETI DRDSPIHPLV IAKTLLKMRM
DVASLACALL VHPYSQRRFE LDTVKQRFGD DIAFLLEGIS RISLLSLRTP EKKQKETTIE
EPEEGASLED GPPTPRSVGE MIGEIHHGTI LVRDENQAEG FRKLVLAMAK DIRVILIRLV
LCLHQLRLAM RMGPVASVAN LSHEVMEIYA PIAHRLGVYW LKNELEDLAF RMQWPGQYDA
IRAKVLERRK GGEDVVQKVI AILGDKLVSH HIQGQVFGRE KHLYSVWSKI NRKQITLDDM
FDLIAYRIIV PNKEDCYRTL GMIHSEFKPI PGRFKDYVAI PKRNGYQSLH TVVFGPFGNR
IEIQIRTEKM HQIAESGVAA HWSYKGKGGG GNSTTGYAWL KDLLALQESV DDPGQFVENV
RFDLFPEEIY VFTPNGEIIT LPSKATPVDF AYAVHSQVGN SCQGAKINGR IVPLKTPLVT
GDTISIITGK NREPNPNWLQ FVVTSKAKYW IGRFVKEKQR QQSIGLGREI LEREGRKVGS
SITEKQLRVV LETFRCENID DLYYNIGISR VSALQVVHKL FPGSAPAFTE RKNQVARAGV
ERRGDKLALT GALEGIAVQA ARCCSPLPGD VVVGIINTGR GITLHRISCN NLKSMEDQPE
RWVEDINWGG DKLLAHTARI RAMVSNRRGL LTPISQVITE AKANLLDVHV QDRDRDPCMV
VLEVEVINHD HLERVLANLR SVPEVRSVDR MNA
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