Gene Mmc1_0235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0235 
Symbol 
ID4481684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp265489 
End bp265998 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content59% 
IMG OID639720981 
Productheptaprenyl diphosphate synthase component I 
Protein accessionYP_864168 
Protein GI117923551 
COG category[S] Function unknown 
COG ID[COG4769] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCT CCCTCACCCC CCTACGGCGG GATCTGCTGA TTGGCTATCT GGCCGTGGCC 
GCCGTAGCCG CCCATATGTT AGAAGCCACC CTGCCCGGTT TGGGCCCCTG GTTTAAACCG
GGGCTGGCCA ATGTTTTTAC GGTGGTCGCC TTTTTTTACC TGGATCGTGA GGCGGCCATT
TGGGTGGCGC TCATACGGGT GTTGGGGGGG TCGCTGGCCA TGGGGGCCTT TCTTACCCCC
AGTTTTTTCC TCAGTGGGGC AGGTATGTTG GGGGCCATTG TGGTCATGCT GCTGCCTCCG
CTACCGGGTA TGGGAGCGGT GGGTCTCTCT ATTCTGATGG CGCTGGCCCA TATGTGCGCC
CAAGTTGCTG CCGCCCATCT TCTGTTTGTA CAACACAGTG GCCTCTTTTA TCTGCTCCCC
TGGTTTCTTC TCGGGGCATG GTGTACGGGC TGGTTCAATG GTGTGTTGGC CCATGGACTG
CTGCACACCC TGCGCCAGCA TAAGGTTTAA
 
Protein sequence
MKTSLTPLRR DLLIGYLAVA AVAAHMLEAT LPGLGPWFKP GLANVFTVVA FFYLDREAAI 
WVALIRVLGG SLAMGAFLTP SFFLSGAGML GAIVVMLLPP LPGMGAVGLS ILMALAHMCA
QVAAAHLLFV QHSGLFYLLP WFLLGAWCTG WFNGVLAHGL LHTLRQHKV