| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0228 |
|---|
| Symbol | |
|---|
| ID | 4483780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 253221 |
|---|
| End bp | 253904 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639720973 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_864161 |
|---|
| Protein GI | 117923544 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1392] Phosphate transport regulator (distant homolog of PhoU) |
|---|
| TIGRFAM ID | [TIGR00153] conserved hypothetical protein TIGR00153 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.775061 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTACAA CGAATCCCTT AGCCTCATTA TTGGGGCGTT CGCCCTTTAA ACCCATGCAA
GAACATATGC GTAAGGTCGT TTTGTGCGCA CAACTGGTAC CGGCACTCTT TGACGCGCTG
GAACAGGATG ACCGCGAAAC CTTAAACCAA GTCAAAGCAT CCATTTTTGA ATTGGAACAT
CAGGCCGATG CCCTAAAAAA CGATCTGCGT GCACATCTGC CAAACTCACT GTTTATGCCG
GTGGCCCGGC GGGACCTACT GGAACTGTTA GAGGTGCAGG ATGCCATAGC AGATTCCGCC
CAAGAGATTG CAGGTATGCT CACCCTGCGG GTGGATCTGG TGCCACCGGC GGGTATGTGT
GGTGCTTTTA AAGCGTTGGC CCAGCACTGC GTACGAACCT GCGAAAAGGC GGGTGAGGCA
ATCGAGCAGC TCGATGAACT GTTGGAAACA GGATTTGGTG GCCGAGAGTC GGAACGGGTG
CAGCGCTTAT TGGGTGAGGT GGGTACGCTA GAGAGCGAAA CCGATAAGTT GGGTATCGCG
CTGTGCCAAT CACTGTTTGA GCGAGAGAAA GATCTTAACC CGGTGATTAC CATTATGCTC
TACCAGATGA TTCGGGAGAT TGGTGAACTG GCTGATAATG CAGAGAAGGT GGGGGATCGC
CTGCGTCTTC TTATCGCACG TTAA
|
|---|
| Protein sequence | MGTTNPLASL LGRSPFKPMQ EHMRKVVLCA QLVPALFDAL EQDDRETLNQ VKASIFELEH
QADALKNDLR AHLPNSLFMP VARRDLLELL EVQDAIADSA QEIAGMLTLR VDLVPPAGMC
GAFKALAQHC VRTCEKAGEA IEQLDELLET GFGGRESERV QRLLGEVGTL ESETDKLGIA
LCQSLFEREK DLNPVITIML YQMIREIGEL ADNAEKVGDR LRLLIAR
|
|---|
| |