Gene Mmc1_0224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0224 
Symbol 
ID4483776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp247999 
End bp248808 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content50% 
IMG OID639720969 
Producthypothetical protein 
Protein accessionYP_864157 
Protein GI117923540 
COG category[S] Function unknown 
COG ID[COG1723] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAAG AAGTACACTA CGATCTTTCT AACGAAGAAT CGTTGATTGC CCAGGCTAGC 
TATCTTGGGC AACGCATTCA ACCCTTGGCG ACGGGTACCA AATACCCGTG GCAGCCACCC
ATGACGGTCA ATCCTGAAGG GGGCTTGGTG GTGCTCTATC GGTTTGGCGT GGCGGTGGCT
TTTCACACCA GTCCCCCCCG TTTTGAGGGG TTGGTTGAGC AACTTGGGGA TCGTTTGGAA
CCCAGTGAGG AGAATCAACT GCATGAGGAG ACGTTGGTAC TACAACGTAC CACCACAGCC
GAACAGGCGG GTCTGCTCAG TCATGGTAAA ATGCTGCTCA GCAGTTTTGA TACCGACCGA
CTTAAATTGA TCGCCGATGT TTTGGCCAAG AGTGTGTTGT TGGCGGTGTA TGAAGAGCAG
GTTTCCCAAA CCTTAGAAAA GATGGAACCG CTCGGTTTAG CCATGCGTAA GGGTCATACT
TTTCCACGCC GGGAACATGG GTTGGTTCAG CATATTGGAG AGGCCTTACA TGTACAAAAT
CGCATGGTTG GCCTGGCTCA AATCGGGGAA AAACCGGAGA TGTTATGGGA TCGCCCAGAT
ATGGAGGCGC TGTTTAACCG TATGGAACGG GAGTATGAAA TTCATGAACG GCAGGCCATT
TTGGAGCGTA AATTGGGGCT GATTCAAAAT ACCGCACAAA CCCTGTTAGA ACTGCACCAA
ACCCGCCACG CTCTCTTTTT GGAGTGGGCC ATTGTGGTGC TGATTGTCAT TGAGGTGGTG
TTTACCGTGC AGGAGCACTT TTTTAAATAA
 
Protein sequence
MSKEVHYDLS NEESLIAQAS YLGQRIQPLA TGTKYPWQPP MTVNPEGGLV VLYRFGVAVA 
FHTSPPRFEG LVEQLGDRLE PSEENQLHEE TLVLQRTTTA EQAGLLSHGK MLLSSFDTDR
LKLIADVLAK SVLLAVYEEQ VSQTLEKMEP LGLAMRKGHT FPRREHGLVQ HIGEALHVQN
RMVGLAQIGE KPEMLWDRPD MEALFNRMER EYEIHERQAI LERKLGLIQN TAQTLLELHQ
TRHALFLEWA IVVLIVIEVV FTVQEHFFK